Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11480g00001 ATGTTTCGTTCCCAACGCTTGAAACCCCTTGTTCTGTATCTAAAGGGACTCACAAGAACAGCGCTTCAAACCCCAAAACCCAATCCTCTGAAATATAGCTCACTCACTTCACAGCAACACTCATTCACGGTTTCCTACCTCATAAGCAACTGCGGGTTCTCACCAGAAACCGCTCTCAAGGCTTCGGAGCGCGTTCGCTTCGAGACCCCTCAGAAGCCCGACTCTGTCATCGCTTTCTTCAGAGACAACGGATTCACCAACTCCCACATAAATGGTATCGTTAAAAGGGTACCCGACGTGCTCGCATGCAACCCCCACAAGAGGCTTTTGCCAAAGTTCGAATTTTTACTCTCCAAGGGTGCTTCGGCCTCTGATATTGTTCAGCTTGTGAACAGGTGCCCCAGAATCCTCGGCTGCAGCCTCGAGAACAACGTAATCCCCACCTTCGAATTGGTAAGAAGGTTCCTTCAATCTGATAAGAAAATTATTGATTGTGTACTCGCCAATCGGCATTTCCTTGATTATAACATTGCCGCACAGAATGTGAACATTCTTGATGATGTTGGAGTCAAGGACTCCAACATCGCCTATTTGTTCCGTACGAGGCCTTCTATTCTCTTGTCTAGTGACTTGGGGAGGGCCGTTGAGGAAGTTAAGGAAATGGGGTTTGATCCTTCCAAGATAGGTTTTGTGATGGCTTTGCACGCCAAAAGGGGCGTTTCAAAATCGCGGTGGGACGCCAAAGTTGATGCCTTTAAGAGCTGGGGTTGGTCTGAAGAAATGGTTCTTGAGGCGTTCAGGAAGCATCCCCTCTTTATGTTAATGTCCAGAGATAAAATTAACGAGGTGATGAGATTTTGGGTTGATAGGTTGGGTTGGGACCCTTTGGCCCTTGCCAAAAGGCCAATCATGTTTGGATATAGTTTGGAGGGAAGGATCATTCCAAGGGGTTTGGTTGTCCGGTATTTGGTTGCAAAGGGTTTGAGAGAAACGGGTGCCAGCTTGTTTACCCCATTCACTATTTCTGAGAAGTTGTTTCTTGAAAAGTATGTGATGCGTTTTAAGGAGGAAATGTGTCAATTGTTACAGTTATACCAGGAGAAAATGAGTTTCAAAGAAAATGGGGAGGATGGTGTAGCATTTGGAAATTTTGGGTTGATTTTCTTCTCACCTTGTCCAAGGAACATAGATTTTTGGTTTAGTTTGGAGAAGTGGATCATTCCAAGGGATTTGGTTGTGCAGTATCTAGTATCCAAAGGTTTGAGGAGCATGAGTGCCAACTTGCTTTCACCTTTTTTTGCATCTGAGAAGATGTTCCATGAAAAGTTTGTGGATTGTTTTCAAGAGGAGGAAAGTACTCGGCTATTGGAGTTATACCTGGGAAAAATGAATGTTGAAGAGGGCACAGGGGAACTACATGTCATACATTAA 1431 0.4479 MFRSQRLKPLVLYLKGLTRTALQTPKPNPLKYSSLTSQQHSFTVSYLISNCGFSPETALKASERVRFETPQKPDSVIAFFRDNGFTNSHINGIVKRVPDVLACNPHKRLLPKFEFLLSKGASASDIVQLVNRCPRILGCSLENNVIPTFELVRRFLQSDKKIIDCVLANRHFLDYNIAAQNVNILDDVGVKDSNIAYLFRTRPSILLSSDLGRAVEEVKEMGFDPSKIGFVMALHAKRGVSKSRWDAKVDAFKSWGWSEEMVLEAFRKHPLFMLMSRDKINEVMRFWVDRLGWDPLALAKRPIMFGYSLEGRIIPRGLVVRYLVAKGLRETGASLFTPFTISEKLFLEKYVMRFKEEMCQLLQLYQEKMSFKENGEDGVAFGNFGLIFFSPCPRNIDFWFSLEKWIIPRDLVVQYLVSKGLRSMSANLLSPFFASEKMFHEKFVDCFQEEESTRLLELYLGKMNVEEGTGELHVIH 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11480g00001 476 Gene3D Transcription termination factor 3, mitochondrial 158 363 IPR038538 -
Mupr11480g00001 476 SMART mt_12 295 329 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 SMART mt_12 196 224 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 PANTHER CGI-12 PROTEIN-RELATED 38 355 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 FunFam Mitochondrial transcription termination factor-like 141 358 - -
Mupr11480g00001 476 Pfam mTERF 78 282 IPR003690 GO:0003690|GO:0006355
Mupr11480g00001 476 Pfam mTERF 179 346 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11480g00001 Mupr-Chr11480 1127 8159 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mupr11480g00001 mTERF 3.7e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11480g00001 K15031 - gmx:100792944 466.077