Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11472g00001 ATGGCCACCCAAATCCAAAAACAGTCACAGCCAAACAACACCATCGATCCAAACAGCGGTTTCTCTTCTCATTCCAGAACCTTCCACAGCCTCCGTCCAAAAGTCCCTCTCCCTCCACCTTCGGAGCCGCTGTCCCTCGCGGACTACGTCCTCTCACTCCTCGCCGGAGCGGAGACCGGCACCGGCACCGGAACCTCCGGCCTCATCGACTCCGCCACGGACAGCCATCTCTCGTACTCCCTCTTCCGCCGCCAAGTCAGTTCACTGGCCTCCTCCCTCCAATCCGTGACCCCTCTCTCCAAAGGCCACGTGGCATTAATCCTCAGCCCCTCTTCCCTGCATGTCCCCGTACTCTACTTCTCCCTCCTCTCCCTCGGCGTCGTAATTGCGCCCGCTAACCCGCTCAGTTCCCCCTCCGAGTTGACTCACCTGGTCCGACTCACCAAGCCCGACATCGCCTTCGCCACCTCCGCCGTCGCAAACACAATTCCCACCCTCCGATTCGGCACCATCCTCATGGACTCCCCGCTCTTCAGTTCAATGCTCGACGCCAACAACGCAGGCCCTCAGCGAGTCGAACTGAGTCAGTCCGACTCGGCGGCGATTCTGTTCTCCTCCGGCACGACGGGGCGAGTGAAGGGCGTGCAGCTCACGCACCGGAACTTAATCGCGCTGATTGCGGGATTTTATCACCTGAAGCTCGTGATGGATGGGGAGCCGCACCCGGTGTCGCTGTTCACGCTGCCGCTGTTCCACGTGTTCGGCTTCTTCATGCTCGTTAGGGCCGTCGCCTTGGGGGAGACGCTCATCTTCATGCAGAGGTTCGATTTCCAAGGGATGCTCAGAGCTGTGGAGAAGTATAAAATCACCTACATGCCGGTGTCGCCGCCGCTCGTGCTGGCGCTCGCCAAGTCCGACCTCGTCAACAAGTATGATCTCAGCTCGCTCCGCTTTTTGGGCAGCGGTGGCGCGCCGCTCGGCAAGGAGGTTTCCGAGGACTTCAAAGCCAAATTCCCCAACGTCGAAATTGGGCAGGGCTATGGTCTAACTGAAAGTGGAGGAGCGGCAGCTAGAATGTTGCTGCCTGACGAGTTAGAGCGTCATGGTTCTGTGGGTCGACTAGCAGAAAATATGGAGGCCAAGATAGTGGACCCTGTAACCGGAGAGGCTTTACTTCCTGGCCTAAAAGGAGAGCTGTGGTTGCGAGGTCCAACAATCATGAAAGGTTATGTAGGAGATGAGAAGGCGACTGTTGAAACAATGGATTCAGAGGGATGGCTGAAGACTGGCGATCTTTGTTATTTTGACTCTGATGGTTTTCTCTACATTGTTGATAGACTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCTGCTGAATTGGAACATATACTTCACACCAATCCTGAAATTGCTGATGCTGCAGTAGTTCCGTATCCTGATGAAGAAGCAGGACAGATTCCAATGGCCTTTGTAGTAAGAAAACCTGGAAGCAACATCACTGCAGATCAGGTCATGGAGTTTGTGGCAAAGCAGGTTTCGCCGTACAAGAAGATACGGCGTGTTTCTTTTATCAACTCTATCCCAAAATCACCGGCTGGGAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTATCCAGTGATAATGGTCCTGGCCTGAAGATTATTGTGAAGCACCTGGTCTACCATGTGTGA 1704 0.5411 MATQIQKQSQPNNTIDPNSGFSSHSRTFHSLRPKVPLPPPSEPLSLADYVLSLLAGAETGTGTGTSGLIDSATDSHLSYSLFRRQVSSLASSLQSVTPLSKGHVALILSPSSLHVPVLYFSLLSLGVVIAPANPLSSPSELTHLVRLTKPDIAFATSAVANTIPTLRFGTILMDSPLFSSMLDANNAGPQRVELSQSDSAAILFSSGTTGRVKGVQLTHRNLIALIAGFYHLKLVMDGEPHPVSLFTLPLFHVFGFFMLVRAVALGETLIFMQRFDFQGMLRAVEKYKITYMPVSPPLVLALAKSDLVNKYDLSSLRFLGSGGAPLGKEVSEDFKAKFPNVEIGQGYGLTESGGAAARMLLPDELERHGSVGRLAENMEAKIVDPVTGEALLPGLKGELWLRGPTIMKGYVGDEKATVETMDSEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEEAGQIPMAFVVRKPGSNITADQVMEFVAKQVSPYKKIRRVSFINSIPKSPAGKILRRELVDYALSSDNGPGLKIIVKHLVYHV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11472g00001 567 CDD 4CL 68 543 - -
Mupr11472g00001 567 MobiDBLite consensus disorder prediction 1 37 - -
Mupr11472g00001 567 Pfam AMP-binding enzyme C-terminal domain 462 537 IPR025110 -
Mupr11472g00001 567 Gene3D - 41 448 IPR042099 -
Mupr11472g00001 567 Gene3D - 449 549 IPR045851 -
Mupr11472g00001 567 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 22 545 - -
Mupr11472g00001 567 Pfam AMP-binding enzyme 70 453 IPR000873 -
Mupr11472g00001 567 ProSitePatterns Putative AMP-binding domain signature. 202 213 IPR020845 -
Mupr11472g00001 567 MobiDBLite consensus disorder prediction 1 29 - -
Mupr11472g00001 567 FunFam 4-coumarate--CoA ligase 2 449 550 - -
Mupr11472g00001 567 SUPERFAMILY Acetyl-CoA synthetase-like 74 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11472g00001 Mupr-Chr11472 3888 9800 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11472g00001 8 551 Monolignol Biosynthesis Gene Families AT5G63380 59.279 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11472g00001 K01904 - gmx:100777435 877.47