Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11467g00003 AGTAAACAGCAGTTTGGTTTAGAGGACGAAAAGTTTCACAAACTATCATGCTGGAAGGAAGATGATATAACAAGTGGCAACTTTAGGTTGGATGCCTTGGATTCTAGATTATCTTCATCTTCTGATGCTGGAGTTATAAGATCTGGATTTAGTATTGATAAATTAAGCCACAGTGGTCATGGAAGCAGCACAACTTCTAGGTCTTTTAAAAGGGGAATGAGAAGGGGATCTGAAGGACTGAAGTCAATTGGGCGATCACTTGGGTTGGGAGTATCTAGGGCAGTGTTCCCGGAAGATCTTAAAGTGTCAGAAAAGAAGATATTTGATCCTCAAGACAAATTTCTGCTCTTATGGAATAAACTTTTTGTTATCTCATGCATTTTGGCTGTGTCTGTGGATCCACTGTTTTTTTATCTCCCAGTCATTAATGATTCATTTCACTGTCTTGGCATAGACCGAAAGTTGGCAACAATAGTTACAACCTTAAGGACAGTGATCGATGCTTTCTATCTTATTCACATGGCTCTCCAATTCCGTACTGCTTATATTGCTCCATCTTCTCGTGTCTTTGGGCGGGGTGAGCTTGTGATAGATTCGGCACAGATAGCCAAGCGATACTTGCGGCGGTATTTCATCATTGATTTCCTATCTGTGTTGCCGATACCACAGATTGTGGTTTGGAGATTTCTTCAAAGGTCAAAAGGTTCAGATGTACTAGCAACAAAGCAGGCCTTGTTGTTCATTATCTTGTTTCAGTATGTTCCTAGATTTCTCCGAATGGTACCATTGACTTCAGAGCTTAAGAGAACAGCAGGTGTCTTTGCTGAAACTGCATGGGCAGGTGCTGCATATTATTTGCTGCTATACATGCTTGCCAGTCATATAGTTGGTTCTTTTTGGTACTTGTTAGCTATTGAACGCAATGACTCGTGCTGGCAGAAGGCTTGCAGTGACAATGGGTGCAATAAAAATTTCCTATATTGTGGGAACCAGTACATGGAAGGTTATAGTGCTTGGCAAAATAAAAGTGAATCTATTCTTGAGTCAAGGTGCTCTGCAGATGGTGATCCTCCGCCTTTTGATTTTGGAATTTTTGAGCAAGTCTTGTCATCTGGCATTATTTCATCTAAAAAGTTCATCTCCAAATACTGTTATTGTTTATGGTGGGGGCTCCAGAATTTGAGTACACTTGGCCAGGGACTTCAAACCAGCACTTATCCTGGAGAGGTTATCTTTTCAATAGCACTAGCTATATTTGGCCTCATCCTCTTTGCGCTTTTGATTGGTAACATGCAGACATATCTTCAGTCTCTCACCATTAGGCTCGAGGAAATGAGAGTCAAAAGGCGTGATTCAGAACAGTGGATGCATCACCGCTTACTCCCACAAGAGCTTAGAGAGCGTGTGAGACGGTATGACCAATATAAGTGGCTGGCAACGCGTGGTGTAGATGAAGAAAATTTAGTTCAGAGTCTACCAAAGGATCTTCGAAGAGATATTAAGCGCCATCTCTGTTTGGCCTTAGTGAGGAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTGCTTGATGCCATATGTGAGAGACTGAAACCATGCTTATTTACGGAGAATACTTACATTGTTCGGGAAGGAGATCCAGTTGATGAGATGCTTTTCATCATTCGTGGTCGCCTTGAGAGTGTTACCACAGATGGTGGGAGAAGTGGATTTTTCAACCGCAGTTTTCTAAAAGAGGCCGACTTCTGTGGAGAGGAGCTTTTAACATGGGCCCTGGATCCTAAATCTGGTTCTAATCTCCCATCTTCTACTAGAACAGTTAAGGCGTTAATGGAGGTTGAGGCTTTTGCCTTAACTGCTGATGAGTTAAAATTTGTTGCCAGTCAGTTTAGGCGCCTTCACAGTAGACAGGTTCAACACACTTTCCGTTTTTACTCCCAACAATGGAGGACCTGGGCTGCATGCTTTATTCAGGCAGCATGGCGTCGGTATTCTAAAAAGAAAATTATGAAGCTTCGTCAAAAGGAAGAAGATGCTGATGAGTCAGAAGGAACTCATGAAAATGTTGGTGGCAGTTCCTACAGCTTTGGTGCTGCCTTGTTAGCCTCAAAGTTTGCCGCACACACTCTCCGTGGTGTACATCGCAATCGACTTGCCAAGACTGCCAGGGAGTTAGTGAAACTACAGAAACCTCCTGAGCCCGACTTCTCTGCAGATGATGCAGATTAA 2229 0.4271 SKQQFGLEDEKFHKLSCWKEDDITSGNFRLDALDSRLSSSSDAGVIRSGFSIDKLSHSGHGSSTTSRSFKRGMRRGSEGLKSIGRSLGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSVDPLFFYLPVINDSFHCLGIDRKLATIVTTLRTVIDAFYLIHMALQFRTAYIAPSSRVFGRGELVIDSAQIAKRYLRRYFIIDFLSVLPIPQIVVWRFLQRSKGSDVLATKQALLFIILFQYVPRFLRMVPLTSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGSFWYLLAIERNDSCWQKACSDNGCNKNFLYCGNQYMEGYSAWQNKSESILESRCSADGDPPPFDFGIFEQVLSSGIISSKKFISKYCYCLWWGLQNLSTLGQGLQTSTYPGEVIFSIALAIFGLILFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPQELRERVRRYDQYKWLATRGVDEENLVQSLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTENTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSFLKEADFCGEELLTWALDPKSGSNLPSSTRTVKALMEVEAFALTADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKKKIMKLRQKEEDADESEGTHENVGGSSYSFGAALLASKFAAHTLRGVHRNRLAKTARELVKLQKPPEPDFSADDAD 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11467g00003 742 Pfam Cyclic nucleotide-binding domain 535 625 IPR000595 -
Mupr11467g00003 742 Gene3D - 120 439 - -
Mupr11467g00003 742 FunFam Cyclic nucleotide-gated ion channel 1 441 505 - -
Mupr11467g00003 742 Gene3D Jelly Rolls 512 632 IPR014710 -
Mupr11467g00003 742 SUPERFAMILY cAMP-binding domain-like 443 634 IPR018490 -
Mupr11467g00003 742 Pfam Ion transport protein 117 440 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mupr11467g00003 742 SUPERFAMILY Voltage-gated potassium channels 109 436 - -
Mupr11467g00003 742 SMART cnmp_10 514 645 IPR000595 -
Mupr11467g00003 742 CDD CAP_ED 514 645 IPR000595 -
Mupr11467g00003 742 ProSiteProfiles cAMP/cGMP binding motif profile. 514 598 IPR000595 -
Mupr11467g00003 742 Gene3D Helix hairpin bin 442 505 - -
Mupr11467g00003 742 FunFam Cyclic nucleotide-gated ion channel 1 512 630 - -
Mupr11467g00003 742 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 99 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11467g00003 Mupr-Chr11467 12013 19509 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11467g00003 27 740 Ion Channels AT2G23980 76.997 0.0 1140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11467g00003 K05391 - gmx:100784309 1299.65