Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11461g00001 ATGTTTTCGGGCGATGGGTCATCGATGGACCCGATGTTTTCCGGCATGAGCCTGCAGTCTCTTCTGTGTCTGAACCCTAGTCTGTTGGGAGAGGGGTTCCCCAGCTTGGGCTCCCTAACGGACGAGCCAAACGTTATTCCCCAATCGGCACAGAAAGTAGTCCTGCTCCCAAAAAGCGAATCCCAGGCGAAACGACAGCGGCTGGACTCGTCGGTGATCCCTCAGAGCAACCTGGCGAGGCAGCGTAGACAGAAGCTGAGCGAGAAGACGAGGTGCTTACAGAAGCTAATGCCCTGGGACAAGAAAATGGACCAAGCCACGCTTCTAGAAGAGGCCTACAAATACGTCAAGTTCTTGCAGGCCCAGTTTCGTGTTCTTCACTCCATGCCATCCAACACCGACCCCTTCCTCCTTCCGCCCATTCAAAACGCAGCCGTATTTGGTGAACTCGACAAGCTCAACAGGACCCAGCTTCTTCAGGTCCTCGTCAACTCCCCCGTCGCCCAAACCATGCTTTATTCCCAAGGCTTCTGCGTTTTCTCCCTCGAACAGTTGTCTTTGCTCAGGAAATTATCCCAGAGGAGGCATCAACACCTGCCCGATCCTAAACTTCCTTCCACTAATTAA 627 0.5343 MFSGDGSSMDPMFSGMSLQSLLCLNPSLLGEGFPSLGSLTDEPNVIPQSAQKVVLLPKSESQAKRQRLDSSVIPQSNLARQRRQKLSEKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFRVLHSMPSNTDPFLLPPIQNAAVFGELDKLNRTQLLQVLVNSPVAQTMLYSQGFCVFSLEQLSLLRKLSQRRHQHLPDPKLPSTN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11461g00001 208 Gene3D - 74 133 IPR036638 GO:0046983
Mupr11461g00001 208 SMART finulus 76 125 IPR011598 GO:0046983
Mupr11461g00001 208 Pfam Helix-loop-helix DNA-binding domain 80 120 IPR011598 GO:0046983
Mupr11461g00001 208 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 60 192 IPR045843 GO:0003700|GO:0006355
Mupr11461g00001 208 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 129 IPR036638 GO:0046983
Mupr11461g00001 208 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 119 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11461g00001 Mupr-Chr11461 2108 2734 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11461g00001 82 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 47.414 8.66e-26 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11461g00001 HLH 0.00028 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11461g00001 - - gmx:102666676 242.276