Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11458g00003 ATGGAGCTTAGCTTTAAGCACCAACTTGGCCTTGTTTGCGTCATACTGCTCTTTCCTGCACTGTGTTACTGCGACGAATATACTAAATCCAGAGCAACCTTTTATAGTACCTCTGATGGCTATGGAACTCCAACGGGAGCTTGTGGCTTTGATGAATATGGAAGGAGGATGAATTGGTATGATGGAAGCGTCGCAGGGGTGTCTGGGCTATGGAGGAATGGAGCTGGATGTGGTACATGCTATCAGGTGAAGTGCCTAATACCAAAATTATGCGATGTGAATGGAGCATACCTGGCGGTTACAGACCAGGGTTATGGAGACAACACAGACTTCGTCATGAGCCCACGCGCCTTCTCAAAATTGGGAATTAACAAAGCTGCATCTGCAGAGCTAAAGAAATACGGTACAGTGGATATTGAATACAAAAGGGTTCCCTGTACATACACTGGCAATGTCTTGTTCCATATAAAGGAAACTAGCACCAACCCTGGTTACTTTGCTCTCGTCATTCTCAATGTAAATGGAATACACGACGTCACTGCTGTTGAAATGTGGCAGATGGAGTCCGGACAATGGAAGCCACTTAACAGGAACTATGGGGCTGTGTTTGACTTTCCTAACCCACCGAGTGGCGAAATCCGATTGAGGTTTCAAGTGAGTGGCCTGTATGAATGGGTGGACCCCAAGATTATCATACCTAGTAATTGGAAGGCTGGAGATACTTTTGTCACCAAGGTTCAGCTTAATTAG 750 0.456 MELSFKHQLGLVCVILLFPALCYCDEYTKSRATFYSTSDGYGTPTGACGFDEYGRRMNWYDGSVAGVSGLWRNGAGCGTCYQVKCLIPKLCDVNGAYLAVTDQGYGDNTDFVMSPRAFSKLGINKAASAELKKYGTVDIEYKRVPCTYTGNVLFHIKETSTNPGYFALVILNVNGIHDVTAVEMWQMESGQWKPLNRNYGAVFDFPNPPSGEIRLRFQVSGLYEWVDPKIIIPSNWKAGDTFVTKVQLN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11458g00003 249 SUPERFAMILY PHL pollen allergen 151 243 IPR036749 -
Mupr11458g00003 249 Pfam Lytic transglycolase 64 133 IPR009009 -
Mupr11458g00003 249 Pfam Expansin C-terminal domain 153 226 IPR007117 -
Mupr11458g00003 249 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 151 IPR007112 -
Mupr11458g00003 249 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 244 IPR007117 -
Mupr11458g00003 249 Gene3D - 20 147 IPR036908 -
Mupr11458g00003 249 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Mupr11458g00003 249 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Mupr11458g00003 249 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Mupr11458g00003 249 PRINTS Expansin/Lol pI family signature 230 244 IPR007118 GO:0005576
Mupr11458g00003 249 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Mupr11458g00003 249 SUPERFAMILY Barwin-like endoglucanases 13 151 IPR036908 -
Mupr11458g00003 249 Gene3D - 148 248 IPR036749 -
Mupr11458g00003 249 PANTHER EXPANSIN-B3 17 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11458g00003 Mupr-Chr11458 30355 32116 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11458g00003 1 248 Expansin Gene Family AT4G17030 42.857 2.23e-72 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11458g00003 - - gmx:100777265 457.988