Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11444g00002 TACACTCCAAGCCTACTTTTTCTATGGCAGCTTAGCCTTCCTATTTGGGAAAGGCTCTTCACTTCTCTCCACCTTTTTCTTTTTTGTGTGTATGAGTTTCTATTCACTGCACTCCCTTTGGCTTTATTACCACCCTCGCTCTCCCCTCTATTAATATTGGTGCTTGGAAAGGGAAGCAAAAGAAGATCCACACAAGTAGTAGCTAGGTTTGTAGTGATCGATCTCGAGATGGGTCGCGGAAAAATTGAGATAAAGTTGATTGAGAACCCCACCAACAGGCAAGTCACCTACTCCAAGCGACGGAATGGTATCTTCAAGAAAGCTCATGAACTCAGTGTTCTCTGTGATGCCAAGGTTTCACTCATCATGTTCTCCAAAAACAACAAGATGCATGAATACATTAGCCCTGGCCTTTCGACAAAAAAGATTATTGATCAGTATCAGAAGACTTTGGGGGATATCGATCTGTGGCGTTCTCACTATGAGAAAATGCTTGAGAACTTGAAGAAGCTGAAAGATATTAACAACAAACTCAGGAGACAGATCAGGCATAGGATAGGTGAGGGTTTGGAGTTGGACGACCTCAGCTTCCAGCAACTTCGCACTCTTGAAGAGGATATGGTTTCTTCCATAGGGAAAATACGCGAACGAAAGTTCCACGTGATCAAAACTCGAACTGATACCTGTAGGAAAAAGGTGAAAAGCTTGGAGCAGATGAATGGAAATCTGCTGCTTGAACTTAAGGAAAAGTGTGTGATCCATCCACAATTTCTTTTGCACGATGAAGGAGACGAGGAATCAGCAGTTGCACTGGCCAACGGTGCCTCCACCCTGTATGCGTTCTGTCAGCACCATACTCATCTGAATCTTCCCCAGCATGGAGAAGAACCCTTTAAAACTGATGATCTTCGCCTTGCT 918 0.439 YTPSLLFLWQLSLPIWERLFTSLHLFLFCVYEFLFTALPLALLPPSLSPLLILVLGKGSKRRSTQVVARFVVIDLEMGRGKIEIKLIENPTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMFSKNNKMHEYISPGLSTKKIIDQYQKTLGDIDLWRSHYEKMLENLKKLKDINNKLRRQIRHRIGEGLELDDLSFQQLRTLEEDMVSSIGKIRERKFHVIKTRTDTCRKKVKSLEQMNGNLLLELKEKCVIHPQFLLHDEGDEESAVALANGASTLYAFCQHHTHLNLPQHGEEPFKTDDLRLA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11444g00002 306 SMART madsneu2 77 136 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 CDD MADS_MEF2_like 78 153 IPR033896 GO:0000977|GO:0045944
Mupr11444g00002 306 Pfam K-box region 159 246 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr11444g00002 306 PANTHER SERUM RESPONSE FACTOR HOMOLOG 79 238 - -
Mupr11444g00002 306 PRINTS MADS domain signature 79 99 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 PRINTS MADS domain signature 114 135 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 PRINTS MADS domain signature 99 114 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 ProSiteProfiles K-box domain profile. 161 253 IPR002487 GO:0003700|GO:0005634|GO:0006355
Mupr11444g00002 306 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 87 133 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 SUPERFAMILY SRF-like 78 172 IPR036879 GO:0003677|GO:0046983
Mupr11444g00002 306 ProSitePatterns MADS-box domain signature. 79 133 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 ProSiteProfiles MADS-box domain profile. 77 137 IPR002100 GO:0003677|GO:0046983
Mupr11444g00002 306 Coils Coil 161 181 - -
Mupr11444g00002 306 Gene3D - 90 177 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11444g00002 Mupr-Chr11444 16660 18707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11444g00002 77 294 MADS-box Gene Family AT3G54340 50.000 1.22e-65 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Mupr11444g00002 K-box 2.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11444g00002 K09264 - gmx:100791963 415.231