Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11438g00002 ATGAAGATTGCTGCTTTTGTGGTTGTGATCCGTACATTTTCCTCTGGTGTTGCGATCTCCGAAGCTGCGAGATTCTTCTGCCTCGACTGCGCACTTCATGTGATTCTGCTTTCCTCTAATCAAGTTTACATTCTAGGAGCGGCGGAATCATATGAGGCAGATGACTGCAGATTACTCGTCTGGGAGAAAGGATCCAAAATGAGTTGGAACCCACACATGGAGGTCCATTACAATAGCATTAGCTATCCCTATAACACAGCAGGAAGTTTTATCGAATATTTTGAAGGTCTCACCTATGAACATGTCAACTTCATTTTTTCTGGTGCATCACATGCTCAGGAGAGTTCATACCCTTCAAATTCAAGCTTTTACAAGTTTGGACTATCTGAACCCGAGAATACTTCGTACTATCGTTACAGTCATGGCTATGAAGTAAGTCACCACGAACCACTGGTGGATGAGTATAGGAGACCTTCAGAGAACTCATTGCCAATCAATGAACAGACAGCAGCAGTAAGCACCGAATGGGTTGAAGGTGGAAACACTGACACACGAGACAATTCTATTGAATGTCCTCGAAGACATCACAGTAATTCCAATGATTATCAGGTCATTTGGCAAGACAATATTGATCCCGACAACATGACCTATGAGGAACTACTTGAATTAGGTGAAGCTGTTGGAACTCAAAGCCGTGGTCTCACCCAAGAACAGATCTCCTCACTTCCAGTGTCAAAGTACAAATGTGGGTTCTTCTTGAGGAAGAAGTCCCGGGATGAGAGGTGTGTGATTTGCCAGATGGAATATAAAAGAGGGGACAAGCGTATCACCTTGCCATGTAAACATGTCTATCATGCTAGTTGTGGGAACAGGCTTGCCCTATATGTTACACGGAAGTGTTTGCCGACAAGTCAAAACACAAATAATCTCGAACGGATAAGTAACCTGCTTATGTTTCTGTTTCTCCTTCAGTGTGGGGGTCTTTCATAG 990 0.4343 MKIAAFVVVIRTFSSGVAISEAARFFCLDCALHVILLSSNQVYILGAAESYEADDCRLLVWEKGSKMSWNPHMEVHYNSISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQESSYPSNSSFYKFGLSEPENTSYYRYSHGYEVSHHEPLVDEYRRPSENSLPINEQTAAVSTEWVEGGNTDTRDNSIECPRRHHSNSNDYQVIWQDNIDPDNMTYEELLELGEAVGTQSRGLTQEQISSLPVSKYKCGFFLRKKSRDERCVICQMEYKRGDKRITLPCKHVYHASCGNRLALYVTRKCLPTSQNTNNLERISNLLMFLFLLQCGGLS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11438g00002 329 SUPERFAMILY RING/U-box 258 288 - -
Mupr11438g00002 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 224 307 IPR013083 -
Mupr11438g00002 329 FunFam E3 ubiquitin ligase BIG BROTHER 224 306 - -
Mupr11438g00002 329 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 70 290 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mupr11438g00002 329 Pfam RING-like zinc finger 262 288 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11438g00002 Mupr-Chr11438 17911 22408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11438g00002 71 300 C3H Transcription Factor Family AT3G63530 39.834 2.04e-51 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11438g00002 K19045 - gmx:100793907 463.766