Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11438g00001 CTGATCATATACCCTTTCTTTCCACCTCTCATCATGACCAATTCCTACAGCTCCAATGACCTTAACTTTTGGTTGGACCTCAATTCACCATGTCTTCTCTCGTCCCCTTCTTCATCATCACCTCCTTCCATCAATCCACCATTCTATTTTCCTTCCAGTTATCATAATAACTACACAAGTGGCATATCTTCCACTCACTTCTTCCAACCCTCTCCTCCTCAAAGAAAAGCCCTTCCCCTCCTTCATCCAAGACACGATGATGATGAAGAAGATCTTGAATCTTCATTCAGTGCCATGGAAGTGGACAAGAAAAAGAAAGAGCAAAGTACTTCATCTAGCTGTTTGGACGAAGAAGATGCTGTAACCGTGGCTTTACACTTAGGGCTTCCAAGCACGAGTGAATCTGCTGATTTAGCTTCTTCAAGCCTATACTCAACAGAGGCTTCAGACAAAGAAGAAAAACTCAGTGGTGCTTCTTCGGGGCTTCTGTCTAATAGAATTAACAGAGGGCAATATTGGATCCCTACTTCTGCTCAGATTCTGATTGGTCCAACACAGTTCGCATGCCCCCTTTGTTTCAAGACGTTCAACAGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATATAGGAAGGGGCCAGAGTCCCTTAGGGGAACACAACCAACGGCTATGCTAAGACTCCCTTGCTATTGCTGTGCACCGGGATGCAAGAACAACATCGACCATCCGAGAGCAAAACCACTCAAAGACTTCAGAACCCTTCAAACTCATTACAAGAGAAAGCATGGGACAAAGCCTTTTGTGTGCAGAAAATGTTGCAAAACGTTTGCTGTGAGAGGTGATTGGAGAACTCATGAAAAGAACTGTGGCAAACGCTGGTATTGCTCTTGCGGGTCTGATTTTAAGCATAAAAGATCTCTTAAGGATCATATCAAGGCATTTGGATATGGACATGCGGCTTATGGAAATGACTGCAACCTTGATCAAGATGACGATCAAGCAGGCTCTGAAATTGAACAAGAAAGTTAA 1041 0.4371 LIIYPFFPPLIMTNSYSSNDLNFWLDLNSPCLLSSPSSSSPPSINPPFYFPSSYHNNYTSGISSTHFFQPSPPQRKALPLLHPRHDDDEEDLESSFSAMEVDKKKKEQSTSSSCLDEEDAVTVALHLGLPSTSESADLASSSLYSTEASDKEEKLSGASSGLLSNRINRGQYWIPTSAQILIGPTQFACPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGTKPFVCRKCCKTFAVRGDWRTHEKNCGKRWYCSCGSDFKHKRSLKDHIKAFGYGHAAYGNDCNLDQDDDQAGSEIEQES 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11438g00001 346 SUPERFAMILY beta-beta-alpha zinc fingers 253 291 IPR036236 -
Mupr11438g00001 346 FunFam Zinc finger protein WIP2 240 322 - -
Mupr11438g00001 346 PANTHER ZINC FINGER PROTEIN WIP2 56 345 IPR043584 GO:0003700|GO:0010468
Mupr11438g00001 346 ProSiteProfiles Zinc finger C2H2 type domain profile. 187 214 IPR013087 -
Mupr11438g00001 346 MobiDBLite consensus disorder prediction 65 115 - -
Mupr11438g00001 346 ProSitePatterns Zinc finger C2H2 type domain signature. 189 209 IPR013087 -
Mupr11438g00001 346 MobiDBLite consensus disorder prediction 79 113 - -
Mupr11438g00001 346 Gene3D Classic Zinc Finger 230 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11438g00001 Mupr-Chr11438 3525 5747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11438g00001 121 344 C2H2 Transcription Factor Family AT3G57670 67.194 2.19e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr11438g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11438g00001 - - gmx:100802239 570.081