Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1141g00003 ATGTCGTCATCGGACTCAATTGAAACGACGTCGGAGAAGAGAGCGTTCGACGCGGAAGCGGCGTCGCGGCTCGTGAAGGACCTGCGGGAAACCTTCGCTTCCGGCAAAACGCGCAGCTACGAGTGGAGAGTGTGGCAGCTCCACGCGCTGGCGAAACTCCTCGACGCTCACGAGCCAGAGATCGTCGGTGCGCTCCGAAATGACATCGCCAAGCCGCCGCTCGAAACCGTCGCTTACGAGGTCTTGTCGTTTCTTCAGCAACCACTGTTACTCTTTGGCCTTGGTTGTGGCGACTATCAATATTCCGAAAATGGTTCTCAGATTGCTATGTTGAAAAACTCATGCAAACTCACACTCAAGGAATTGAAACATTGGATGACTTCTGAAAAGGTCAAAACTTCAATCACAACTTTTCCTTCTTCAGCTGAAATAGTATCTGAACCACTGGGGGTTGTGTTAGTCATCTCTGCATGGAACTACCCTTTTCTGTTGTCACTTGATCCAGTCATTGGAGCTATTGCAGCTGGTAATGCTGTGGTTTTAAAACCATCAGAAATTGCTCCAGCCACATCATCACTGATGGCAAAACTGGTGGGAGACTACATGGATAACTCATTTATAAGAGTTGTCGAGGGAGCAGTTGATGAAACAACCGCACTATTGCAGCAAAAGTGGGACAAGATTTTCTACACAGGTAATGGACGGGTGGCACGCATTGTGATGGCTGCTGCTGCGAAACACCTTACGCCAGTTACTCTGGAGCTTGGAGGAAAATCTCCAGTTGTTGTTGATTCAAATATTAATTTAAAGGTAGCAACAAGACGAATAATTGCAGGAAAGTGGGGTTGTAATAATGGACAAGCCTGCATTTCTCCAGATTATATTATAACAACAAAAGACTATGCTCCCAAGTTGGTGGATTCCCTAAAGACTGAATTGGAGAAATTTTATGGAAAGAACCCATTGGAATCAAAAGATTTGTCTCGTATTGTAAACTCCAACCACTTTGCTCGCTTGACAAAGCTCTTGGATGATGATAAGGTTTCTGGTAAGATTGTTTATGGAGGAGAAAAGGATGAAAGCAATTTGAAGATTAGCCCCACTGTTCTGTTGGATGTCCCACGGGATTCTTTGATTATGAGTGAGGAGATATTTGGTCCTTTACTTCCCATCATTACGGTTGACAAACTGGAAGAAAGCTTTGGTGTGATCAATTCAGGATCAAAACCTCTCGCTGCATATATATTTACAACTAACAAGAAGCTCAAGGAGCAATTTGTTGCAACTATTTCAGCTGGCGGTTTGCTTGCAGTTCATACTTTACCATTTGGGGGAGTTGGTGAGAGTGGAGTGGGTGCATACCATGGGAAATTCTCATTTGATGCTTTTAGCCACAAAAAAGCAGTTCTTTATCGCAGTTTTCTTGGTGATGCAGCAGTAAGGTATCCACCATACACAAACACAAAGCTGAGATTGATGAAAGCTCTCATTGGTGGTGGTCTACTTGGTATTATTCGTGCCCTGTTTGGTTGGTCCTAG 1539 0.4451 MSSSDSIETTSEKRAFDAEAASRLVKDLRETFASGKTRSYEWRVWQLHALAKLLDAHEPEIVGALRNDIAKPPLETVAYEVLSFLQQPLLLFGLGCGDYQYSENGSQIAMLKNSCKLTLKELKHWMTSEKVKTSITTFPSSAEIVSEPLGVVLVISAWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLMAKLVGDYMDNSFIRVVEGAVDETTALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVTLELGGKSPVVVDSNINLKVATRRIIAGKWGCNNGQACISPDYIITTKDYAPKLVDSLKTELEKFYGKNPLESKDLSRIVNSNHFARLTKLLDDDKVSGKIVYGGEKDESNLKISPTVLLDVPRDSLIMSEEIFGPLLPIITVDKLEESFGVINSGSKPLAAYIFTTNKKLKEQFVATISAGGLLAVHTLPFGGVGESGVGAYHGKFSFDAFSHKKAVLYRSFLGDAAVRYPPYTNTKLRLMKALIGGGLLGIIRALFGWS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1141g00003 512 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 253 260 IPR029510 GO:0016491
Mupr1141g00003 512 PIRSF ALDH 4 500 IPR012394 GO:0006081
Mupr1141g00003 512 FunFam Aldehyde dehydrogenase 97 260 - -
Mupr1141g00003 512 FunFam Aldehyde dehydrogenase 257 449 - -
Mupr1141g00003 512 PANTHER ALDEHYDE DEHYDROGENASE 106 499 IPR012394 GO:0006081
Mupr1141g00003 512 SUPERFAMILY ALDH-like 15 472 IPR016161 GO:0016491
Mupr1141g00003 512 Pfam Aldehyde dehydrogenase family 103 469 IPR015590 GO:0016491
Mupr1141g00003 512 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 104 467 IPR016162 GO:0016491
Mupr1141g00003 512 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 257 449 IPR016163 GO:0016620
Mupr1141g00003 512 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 86 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1141g00003 Mupr-Chr1141 20932 26528 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1141g00003 108 510 Aldehyde Dehydrogenase Gene Family AT1G44170 73.966 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1141g00003 K00128 - gmx:100778722 812.372