Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11406g00004 ATGTATTCCTTCCGTTCCTCTAGTTTAATCCCCGACTTTGAGATCGATGAGGCGAGTTGTATGTTCTATGCCGATAACCGTGAATTGCCTTCGGAAATTAAAACGAACAAGAGAATGTACGAAGTGTTTTTGAGTTTCAGAGGAGAAGACACTCGCGCTTCTTTCGTTTCACATCTCCACGCCTCTCTTGAGAACGCGGGAATAATTGTTTTCAAGGATGACGAGTCACTTCCAAGGGGAGATAAAATTTCAGAGTCGCTTTTGCGAGCAATCGAGCAGTCTGAATGTAGTGTAGTTGTATTCTCAAGGAATTACGCAGAGTCGGGATGGTGTATGAAAGAGTTGGAGAAAATAATGGAGTGCCACAGAACCATAGGGCAGGTAGTTGTGCCTGTCTTCTATGATGTTGATCCCTCCCAAGTACGTCATCAAACGGGCGAGTTTGGAAAAGGATTTGAAAATCTTGAGACAAGGATTTCAACAGAGAATTGGGAGACGGCATGGTATAGGTGGATTGATCGGTTAAACGAATTAGATAGGGAGCTCGTGAGGAAGAGGGAGATAAAAGAATTAAATAGGGAGAACGAGAGGAGGAAGGAGATACTTCGCGAGGCTGCTGCCATCGCGGGGCATGTAGTCCCAAATTCCAGGAACGAAAGCGAGGCTATAAAAACTATTGTTGAAAATGTTACTCGTTTATTAGATAAGACAGAATTGTTCATTGCCCATAATCCAGTGGGACTAGAATCTCGAGTACAAGATATAATTCATTTGTTAGATCACAAACTATCAAATGATGTTTTAATACTAGGGATATGGGGAATGGGGGGCATTGGTAAAACAACCCTTGCAAAAGTCATTTACAATAAGATTGGACGCAATTTTGAGGGAAGGAGTTTCCTTGCTCATATTAGGGAAGTTTGGGGGCAATACACTGGCAGAGTCCATTTACAAAAAAAGCTTCTGTTTGATATCTACAAAGGAAATAAAATAGAGTTTAACATTGAATCAGGAGAAAATGTATTAGAGAAAAGACTTCGTCACAAAAAGGTACTTGTTGTACTTGATGATGTGAATGAATTAGACCAATTGAATGCTTTATGTGGGAGTCGGACATGGTTTGGTTCTGGGAGTAGAATAATCATCACAACCAGAGATAAAGATGTACTTAGAGGGAAGAAAGTTAACAAAATATATAAGATGAAAGAAATGAATGAAGGTGAATCTATTGAGCTTTTTAGTTGGCACGCATTCAAGCAAGCAAGTCCTAGAGAAGATTTTGTCGAACTTTCTAGAAATGTAATTAGATATTCCAGTGGATTGCCACTAGCTCTTGAAGTCCTCGGGTCTTATTTGTTTGATATGGAGGTAACAGAGTGGAAGAGTACATTGGAGAAACTCAAGAGAATTCCTAATGATCAAGTACAGAAGAAGTTAAAAATAAGCTATGATGGTTTAAGTGATGATACAGAGAGAGATATATTCCTTGATATAGCTTGTTTCTTCATTGGAATGGACCGAAATGATGTTATACATATATTGAATGATTGTGGACTTTTCGCTGAGAATGGAATACGTATCCTTGTAGAGCGAAGCCTTGTAACTGTTGACGATAACAACAAGCTTGGAATGCATGATTTGTTACGAGACATGGGAAGAGAAATCATTCGTGCAAAATCACCAAGGGTGCCTGAGGAGCGTAGCAGGTTATGGTTTGAGGAGGATGTGCTTGATGTATTATTAAAAGAAACTGGAACAAAAGCTGTTGAGGGATTGACTTTGATGTTGCCAAAAACTAATACAAAATGTTTTAAAACTACAACCTTCAAGATGATGAAGAAACTCAGGTTGATTCAACTTGCAAATGTAGAACTTGATGGAGATTTTAAAAACCTTTCAAGTGATTTGAGATGGCTATGTTGGCATGAATGTCCCTTAGAATGCATACCGACAGACTTTTATCAAGGAAAATTAGTTTCCATTGAGCTAGAGAAGAGCAATATCAAACTTCTGTGGAAAGAGACCCAGGAAAAGTTTAGCAAATAA 2046 0.3886 MYSFRSSSLIPDFEIDEASCMFYADNRELPSEIKTNKRMYEVFLSFRGEDTRASFVSHLHASLENAGIIVFKDDESLPRGDKISESLLRAIEQSECSVVVFSRNYAESGWCMKELEKIMECHRTIGQVVVPVFYDVDPSQVRHQTGEFGKGFENLETRISTENWETAWYRWIDRLNELDRELVRKREIKELNRENERRKEILREAAAIAGHVVPNSRNESEAIKTIVENVTRLLDKTELFIAHNPVGLESRVQDIIHLLDHKLSNDVLILGIWGMGGIGKTTLAKVIYNKIGRNFEGRSFLAHIREVWGQYTGRVHLQKKLLFDIYKGNKIEFNIESGENVLEKRLRHKKVLVVLDDVNELDQLNALCGSRTWFGSGSRIIITTRDKDVLRGKKVNKIYKMKEMNEGESIELFSWHAFKQASPREDFVELSRNVIRYSSGLPLALEVLGSYLFDMEVTEWKSTLEKLKRIPNDQVQKKLKISYDGLSDDTERDIFLDIACFFIGMDRNDVIHILNDCGLFAENGIRILVERSLVTVDDNNKLGMHDLLRDMGREIIRAKSPRVPEERSRLWFEEDVLDVLLKETGTKAVEGLTLMLPKTNTKCFKTTTFKMMKKLRLIQLANVELDGDFKNLSSDLRWLCWHECPLECIPTDFYQGKLVSIELEKSNIKLLWKETQEKFSK 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11406g00004 681 Coils Coil 184 208 - -
Mupr11406g00004 681 Pfam TIR domain 40 229 IPR000157 GO:0007165
Mupr11406g00004 681 ProSiteProfiles TIR domain profile. 38 234 IPR000157 GO:0007165
Mupr11406g00004 681 PRINTS Disease resistance protein signature 345 359 - -
Mupr11406g00004 681 PRINTS Disease resistance protein signature 438 452 - -
Mupr11406g00004 681 PRINTS Disease resistance protein signature 269 284 - -
Mupr11406g00004 681 Pfam NB-ARC domain 249 483 IPR002182 GO:0043531
Mupr11406g00004 681 SMART till_3 39 181 IPR000157 GO:0007165
Mupr11406g00004 681 Gene3D - 403 487 IPR042197 -
Mupr11406g00004 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 233 498 IPR027417 -
Mupr11406g00004 681 Gene3D - 34 241 IPR035897 -
Mupr11406g00004 681 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 671 IPR044974 GO:0006952
Mupr11406g00004 681 SUPERFAMILY Toll/Interleukin receptor TIR domain 30 176 IPR035897 -
Mupr11406g00004 681 SUPERFAMILY "Winged helix" DNA-binding domain 474 580 IPR036390 -
Mupr11406g00004 681 Gene3D - 242 398 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11406g00004 Mupr-Chr11406 30136 34266 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11406g00004 35 679 WRKY Transcription Factor Family AT4G12020 29.072 1.47e-65 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11406g00004 - - gmx:100800964 908.286