Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11400g00002 ATGATTTCTGCTGGGATTAACTTGGTGATGACTGTGATTGGGTTTGCGGTGAGCACCATGTTCATTGTTTTCGTCTGCACTAGACTCATATGTGCTCGAATTCACCTGAATGCTTCAAGGAGATCCTTTCCTATTGCCTCCAGATCCAATCTCAGCATGATGGAGCGGGGTTGCCATGGTCTTGAACGCGCAGCTGTAGCTAAATTTCCAACAAAGAAGTTTAGTGACAAGTTTTTTGCTGCAGCAGAAAATTCTCAATGCACAGTCTGCCTCTCAGAATACCAAGGTGAAGATATGCTGCGGATCCTCCCCTATTGTGGACACTCCTTCCATGTAACCTGCATAGACTTGTGGCTGCAGCAGAATTCTACTTGTCCTGTTTGTCGAATATCGTTGCGCGAATTTCCTGAGAGAAAGCAGCTAATGCAACCCTTGTTCAGCTCTGCCTTGCAGCCTCATTATGGCATAGAATCCTTTGACACGCATCATTATCACTGTATGATGGCTGGTAATGAATTACCATCAAGAACCCCTGACAACCATGGGGTGAATCACATAGAAGAGGATCATTTTCCATCTGAGGGTGGTGGAGCAGTTGCTATGGACAATATCACCTGTTTAAGTGAGGGTGACTTCATTAAAAATGAAGGGAAGAAGCATGTGGAGAGTCCATCAAACTTCCAGATTTGA 690 0.4478 MISAGINLVMTVIGFAVSTMFIVFVCTRLICARIHLNASRRSFPIASRSNLSMMERGCHGLERAAVAKFPTKKFSDKFFAAAENSQCTVCLSEYQGEDMLRILPYCGHSFHVTCIDLWLQQNSTCPVCRISLREFPERKQLMQPLFSSALQPHYGIESFDTHHYHCMMAGNELPSRTPDNHGVNHIEEDHFPSEGGGAVAMDNITCLSEGDFIKNEGKKHVESPSNFQI 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11400g00002 229 SUPERFAMILY RING/U-box 81 135 - -
Mupr11400g00002 229 SMART ring_2 87 128 IPR001841 -
Mupr11400g00002 229 CDD RING-H2_EL5-like 86 129 - -
Mupr11400g00002 229 PANTHER OS11G0150450 PROTEIN 1 187 - -
Mupr11400g00002 229 Pfam Ring finger domain 86 129 IPR001841 -
Mupr11400g00002 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 134 IPR013083 -
Mupr11400g00002 229 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Mupr11400g00002 229 FunFam E3 ubiquitin-protein ligase ATL6 49 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11400g00002 Mupr-Chr11400 15323 17951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11400g00002 45 136 C3H Transcription Factor Family AT4G10150 41.304 1.66e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11400g00002 - - gmx:100794979 447.973