Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1139g00005 ATGGAGTTTTCCAGTTTCCATCTTCAGCATCAGCTCCAAGAAGAATCTGCAACCCCACCACTAGACAATGGTTATAACAGTGGCTTTCAAACTGAGAGCTTTACAAATTCAAGAGAACTACATCACAAGCACGCCATGACTGATTCACTTAGAATTTCAACAAGACAAGCCTTTGGTTTTGACAACGGAAAAAGCCTCACTCAACAGCCAGCTAGTGATCTCTTTCCAGCAAGAATAATCAACATGAAGGCTACGGAGGAACCATGTTCACTAATCTCATTAATTCATGAACCACAATATTACTCTTCTCCTAGTTTCTCATCTAACCTTCGTGTAACCGGTGAAGAGTTTTTTCCTATGGATGGAGGAGGGACCCTAAGTAAGAGACATAACACTGGTGATGTTGCCTTAATTTCGAATTTACCAACCCTAGATATGACCTCTTCCTTAGTTTCGTGTTCTTTGGGCTCAAATCCTAAAATGTTAGATCTGCATACAAGCTATGGTGGAATCTGTGGCCTCCGACCTTGCTATGATTCTTTTGGTCTTAAGGAGAGCATCTCTGTGAGTCAGAGCAGCATGCATGGCCGCGAAAATAGTCCATCAAACAGCTCAAATAATATTTCATCATATACAAGTGAAGTTGCAAAGACGAAAAGGCCTAGCAATTGCTCTCTAACAAAAGAATCTGAAGCAAAAGCTAAGAAGTCAAGGCTATCATCATGCCCGCCCCTGAAGGTCAGAAAGGAAAATTTGGGGGATAGAATCCAAACTCTTCAGAGACTAGTGGCACCTTTCGGGAAGACCAGTACAGCCTCTGTCTTGAGTGAAGCCATTGGCTACATCCATTTCCTTCACCAACAAATCCAGACTTTGAGCATTCCTTACATGAAACCATCGCAAAGCAAGCCCTCTAGAATGGTGCAGCTGGATTCAAATAAGGTAGATAGCAGAGAACTCAAGCCAGACCTTAGAAGCAGAGGCTTGTGTCTTGTACCCCTTTCTTACGCATCATTTATTCATCGTTGTGTTTAG 1035 0.4242 MEFSSFHLQHQLQEESATPPLDNGYNSGFQTESFTNSRELHHKHAMTDSLRISTRQAFGFDNGKSLTQQPASDLFPARIINMKATEEPCSLISLIHEPQYYSSPSFSSNLRVTGEEFFPMDGGGTLSKRHNTGDVALISNLPTLDMTSSLVSCSLGSNPKMLDLHTSYGGICGLRPCYDSFGLKESISVSQSSMHGRENSPSNSSNNISSYTSEVAKTKRPSNCSLTKESEAKAKKSRLSSCPPLKVRKENLGDRIQTLQRLVAPFGKTSTASVLSEAIGYIHFLHQQIQTLSIPYMKPSQSKPSRMVQLDSNKVDSRELKPDLRSRGLCLVPLSYASFIHRCV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1139g00005 344 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 108 338 - -
Mupr1139g00005 344 MobiDBLite consensus disorder prediction 192 240 - -
Mupr1139g00005 344 MobiDBLite consensus disorder prediction 192 223 - -
Mupr1139g00005 344 CDD bHLH_AtbHLH_like 246 293 IPR045239 -
Mupr1139g00005 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 236 285 IPR011598 GO:0046983
Mupr1139g00005 344 MobiDBLite consensus disorder prediction 1 30 - -
Mupr1139g00005 344 Gene3D - 246 303 IPR036638 GO:0046983
Mupr1139g00005 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 246 300 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1139g00005 Mupr-Chr1139 32657 36852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1139g00005 214 339 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 55.725 5.43e-37 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1139g00005 - - gmx:100785177 482.641