Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11388g00004 ATGATGATGGGTTATTCTTCCAGATTCTATGTTGTTTTGGTTTTGTCCATTTGTGGGGTGGTTTCTTTAGCTTCCCCTATTGAAGATCAGAAGAGAGATAGAATTACTCAGCTGCCAGGGCAGCCAAAGGATGTGGGGTTTGCTCAGTATTCAGGCTATGTGACTGTGAATGAGGAGAGTGGGAGAGCACTGTTTTACTGGTTGGTTGAGGCACCACTGAGGCGTGGACCAAGGTCAAGGCCACTAGTGTTGTGGCTTAATGGTGGCCCTGGTTGTTCCTCTATTGCTTATGGTGCATCTGAGGAAATTGGTCCTTTTCACATTAGGCCTGATGGCAAGTCACTTTACTTGAACCCTTATGCTTGGAACAATTTGGCAAATATACTGTTCCTTGATTCTCCTGCTGGTGTTGGTTTTTCATATACCAATAAAACAACCGATCTGTATACATTTGGTGATCAGAGAACAGCTGAAGATGCGTATACGTTTCTTGTTAATTGGTTTGAAAGATTTCCTGAGTATAAGCATAGAGAATTCTACATTGCTGGAGAAAGTTATGCAGGTCATTATGTTCCTCAGTTGGCTCAAATTGTTCACCAGAAAAATAAGGGAATCGAAAATCCAGTTATAAATTTTAAGGGGTTTTTGGTTGGTAATGCTGTTACCGATGATTATCATGATTATGTTGGCACATTTGAATATTGGTGGACCCATGGTTTGGTTTCAGATTCCACGTATAGGATGCTAAGAATTGCCTGCGATTTTGGGTCCTCTCAGCATCCATCAGTGCAATGCATGCAGGCTCTGAGAGTTGCAGTTGTGGAGCAGGGTAACATTGATCCATATAGCATCTATACACAGCCTTGTAACAGCACAGCATCACTCAGACGCGGCTTGAAGGGTCGCTATCCATGGATGTCTCGAGCATACGATCCATGTACTGAAAGGTATTCTGATTTGTATTTCAACCGTCCAGAAGTTCAGAAGGCACTTCATGCCAATGTAACTGGGATTCCTTATGCATGGAAAACATGCAGTGATATTGTTGGGAACTATTGGACTGATTCTCCATTATCTATGCTACCTATATATCAAGAACTTATTAATGCTAGCCTCCAAATATGGGTATACAGTGGGGACACTGATGCTGTGGTTCCAGTGACTGCTACTCGATATTCAATTGATGCCTTGAAGTTACCTACCATCATCAATTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAAAGGGTTGACATTGGTTACAGTAAGAGGAGCTGGACATGAGGTTCCTCTTCATAGGCCCCGCCAAGCATTTATTCTTTTTAGGTCATTCTTGGAGGACAAGTCCATGCCATCACCAAGTTAG 1386 0.4257 MMMGYSSRFYVVLVLSICGVVSLASPIEDQKRDRITQLPGQPKDVGFAQYSGYVTVNEESGRALFYWLVEAPLRRGPRSRPLVLWLNGGPGCSSIAYGASEEIGPFHIRPDGKSLYLNPYAWNNLANILFLDSPAGVGFSYTNKTTDLYTFGDQRTAEDAYTFLVNWFERFPEYKHREFYIAGESYAGHYVPQLAQIVHQKNKGIENPVINFKGFLVGNAVTDDYHDYVGTFEYWWTHGLVSDSTYRMLRIACDFGSSQHPSVQCMQALRVAVVEQGNIDPYSIYTQPCNSTASLRRGLKGRYPWMSRAYDPCTERYSDLYFNRPEVQKALHANVTGIPYAWKTCSDIVGNYWTDSPLSMLPIYQELINASLQIWVYSGDTDAVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTLVTVRGAGHEVPLHRPRQAFILFRSFLEDKSMPSPS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11388g00004 461 Gene3D alpha/beta hydrolase 29 291 IPR029058 -
Mupr11388g00004 461 FunFam Carboxypeptidase 360 454 - -
Mupr11388g00004 461 Pfam Serine carboxypeptidase 39 453 IPR001563 GO:0004185|GO:0006508
Mupr11388g00004 461 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Mupr11388g00004 461 Gene3D - 360 453 - -
Mupr11388g00004 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Mupr11388g00004 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Mupr11388g00004 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Mupr11388g00004 461 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Mupr11388g00004 461 SUPERFAMILY alpha/beta-Hydrolases 30 457 IPR029058 -
Mupr11388g00004 461 FunFam Carboxypeptidase 29 291 - -
Mupr11388g00004 461 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Mupr11388g00004 461 Gene3D - 313 349 - -
Mupr11388g00004 461 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 35 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11388g00004 Mupr-Chr11388 36311 41213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11388g00004 323 457 Calmodulin-binding Proteins AT2G22960 27.941 2.82e-12 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11388g00004 K16297 - gmx:100812000 923.309