LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr11382g00001	ATGTACAGCAGCGATAACAGCGACGGTGACAACAATGACACCCTTGACTTCAGAAACTTGAAGGTGGTCTCCGCGTTGGGGCGCGGTGCCAAGGGCGTGGTGTTCCTGGCCAGGCCGTACGGCGCGGTGGCCGGGGAGTGGCTGGCGCTAAAAGTCGTATCCAAGGCGTTGCTGCGGAAGAAGAATAGGAACAACGGAGGGTGCAAGAGGGTGTCGTTCGAGAGACACATACTACGTCGTTTGAATCACCCGTTGTTGCCAAGGTTCCGAGGAGCCTTCGAATCAGAACAACTCACCGGATTCGCTATCGATTATTGCCACGGTGGAAATCTACATTCACTCAGGAAGAAGCAATCGGAGAAGATGTTCTCTGAAGAAACCATAAGGTTTTATGCAGTGGAATTGGTCCTAGTATTAGAGTATTTGCACAACTTCGGAGTAGTGTATAGAGATTTGAAGCCGGAAAACATCATGATCCAAGAAACAGGTCATATAATGCTAGTGGATTTTGATCTCTCCAAGAAGTTGAACCTGAAGTCAAACCCATCAAGTGGTAACTCGTCACCGGGTTCTGACTCGTCATCAGAGAAGGATCGAAGAAAGCGACGATTATCGCGATTCAATTGTTACTGTCACTCAGGTATACCGCTTCATGACTTAGAGATTCCAAGTCAACTCGACACAATCCCAAGGCGTAGGAGCGAGTCGGACTCAGTGGAAAAGTCAAACTCATTTGTGGGAACTGAGGATTACGTGGCACCCGAGGTTATATCAGGTGAAGGACACGATTTTGGAGTTGATTGGTGGTCTTTGGGTATTGTTTTGTATGAGATGCTTTATGGGACGACACCATTTAAGGGTGCAAATAGAAAAGAAACATTTCACCGAATCATAACCAAGGAGCCTGATTTGACAGGTGAAACGACGCAATTAAGAGACTTGATTAAAAGGTTGCTTGAAAAGGATCCTAACCGTAGGATCGAAGTGGATGAGATTAAGGGCCACAATTTCTTTAAAGGTGTGAAATGGGACACCATCTTGGAAATTGCGCGTCCACCGTATATTCCTCAAAATGAAATTCAGGACAAAGGAGGATTTTCGAGAAAAGATGTGGAGTCGTTTGTTCATGGGATATTTTTCCCAAAGAATAAAGGTGAGGAAGATAAAACGAAAGGAGGAGAGCAAAAGAGGAGTGAAAATGAAAAGCAAAAAGAGGATGATAATAATCAGAATAATAAGAATGCGTGGGTTGACAAGTTGAATCAAGATTCGACTAAGGATGAAAATTTTTTAAGGCAAATTCATAAAGTTAGAACCTCTAAGAGAGAAAAAGTACACAATGGTTATCATTATGCTAAACTAGATCCAAGAGGGGGTGAATTGAATTTTTAA	1392	0.4368	MYSSDNSDGDNNDTLDFRNLKVVSALGRGAKGVVFLARPYGAVAGEWLALKVVSKALLRKKNRNNGGCKRVSFERHILRRLNHPLLPRFRGAFESEQLTGFAIDYCHGGNLHSLRKKQSEKMFSEETIRFYAVELVLVLEYLHNFGVVYRDLKPENIMIQETGHIMLVDFDLSKKLNLKSNPSSGNSSPGSDSSSEKDRRKRRLSRFNCYCHSGIPLHDLEIPSQLDTIPRRRSESDSVEKSNSFVGTEDYVAPEVISGEGHDFGVDWWSLGIVLYEMLYGTTPFKGANRKETFHRIITKEPDLTGETTQLRDLIKRLLEKDPNRRIEVDEIKGHNFFKGVKWDTILEIARPPYIPQNEIQDKGGFSRKDVESFVHGIFFPKNKGEEDKTKGGEQKRSENEKQKEDDNNQNNKNAWVDKLNQDSTKDENFLRQIHKVRTSKREKVHNGYHYAKLDPRGGELNF	463

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr11382g00001	463	ProSiteProfiles	Protein kinase domain profile.	20	338	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr11382g00001	463	PANTHER	FLIPPASE KINASE 1-RELATED	12	361	-	-
	Mupr11382g00001	463	Gene3D	Transferase(Phosphotransferase) domain 1	239	357	-	-
	Mupr11382g00001	463	Gene3D	Transferase(Phosphotransferase) domain 1	110	179	-	-
	Mupr11382g00001	463	MobiDBLite	consensus disorder prediction	382	412	-	-
	Mupr11382g00001	463	FunFam	Serine/threonine-protein kinase OXI1	240	357	-	-
	Mupr11382g00001	463	MobiDBLite	consensus disorder prediction	420	436	-	-
	Mupr11382g00001	463	SUPERFAMILY	Protein kinase-like (PK-like)	19	360	IPR011009	-
	Mupr11382g00001	463	SMART	serkin_6	20	338	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr11382g00001	463	Pfam	Protein kinase domain	240	338	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr11382g00001	463	Pfam	Protein kinase domain	22	184	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr11382g00001	463	MobiDBLite	consensus disorder prediction	179	198	-	-
	Mupr11382g00001	463	Gene3D	Phosphorylase Kinase; domain 1	20	109	-	-
	Mupr11382g00001	463	FunFam	Serine/threonine-protein kinase OXI1	110	178	-	-
	Mupr11382g00001	463	MobiDBLite	consensus disorder prediction	382	463	-	-
	Mupr11382g00001	463	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	147	159	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr11382g00001	Mupr-Chr11382	930	3852	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr11382g00001	14	431	AGC Kinase Gene Family	AT3G25250	53.738	7.81e-146	421

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Mupr11382g00001		Pkinase	6.3e-32	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr11382g00001	K20714		-	gmx:100813693	652.514