Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11378g00001 ATGGACAAGGACAAGGACAAGTCTCACACTCACAGCTTTCTTCACAGTTTTGTTAAACACTTCAAATTCGGTTCCAGTAAAGACCGAAACAATGAAGCTGACATACAGAAAATGGCTGCACAGGAGCAGAAGATCTTTGCCTACGAAACCTTGGCTGCTGCCACCAAGAATTTTAGTGCTATTCATAAGCTAGGTGAAGGAGGTTTTGGACCTGTCTACAAGGGGAAGCTGAATGACGGGAGAGAGATTGCTGTGAAGAAGTTATCACACACTTCAAATCAAGGGAAAAAGGAGTTTATGAATGAGGCCAAGTTATTGGCTCGTGTGCAGCATCGGAATGTCGTGAATTTGGTGGGCTATTGTGTCCATGGCTCGGAGAAGCTACTTGTTTATGAGTATGTCGCTCATGAAAGCCTTGACAAGCTTCTATTCAAATCGCAAAGGAGAGAGCAGCTTGATTGGAAACGTAGGCTAGGCATAATCACAGGCGTGGCAAAGGGGTTGCTTTATCTTCACGAAGACTCGCACAATTGCATCATCCATAGGGACATAAAGGCGAGTAACATTTTGCTTGATGACAAATGGACGCCCAAGATTGCAGATTTTGGCATGGCCCGTCTCTTCCCGGAAGATCAAAGCCAGGTCAATACACGAGTGGCTGGAACCAATGGCTATATGGCTCCGGAGTATGTGATGCATGGAAATCTATCGGTGAAGGCAGATGTATTTAGTTATGGAGTTTTGGTTTTGGAGTTGATCACCGGCCAAAGAAACTCGTCTTTTAATTTGGACGTGGACGCACTGAATCTGCTTGATTGGGCATACAAGATGTACAAGAAAGGGAAGAGCTTAGAAATTGTGGATTCCGCATTAGCATCTACGATGGTAGGTGAAGAGGTAGCGATGTGCATTCAGCTGGGTTTGTTATGTGCTCAAGGCGATCCACAGCTACGTCCCACGATGAGGCGCGTGGTGGTGATGCTGTCGAGAAAACCAGGCCAGATGCAAGAACCAACAAGACCAGGGGTACCTGGTTCAAGATACAGAAGACCTCACAGACACTCTGCCTTGTCTTCCACAGTGGGTACCTCTGCTGCCTCTGATTCACAAACTTCTGATTCAAGCAATAATTATACTACTAGTGCCACTGGGACTAGCTCAGCTACTGCAGAACCAGACCCTAAAGGGAAACGTCCAATGCGGGAGGGTTAG 1212 0.4645 MDKDKDKSHTHSFLHSFVKHFKFGSSKDRNNEADIQKMAAQEQKIFAYETLAAATKNFSAIHKLGEGGFGPVYKGKLNDGREIAVKKLSHTSNQGKKEFMNEAKLLARVQHRNVVNLVGYCVHGSEKLLVYEYVAHESLDKLLFKSQRREQLDWKRRLGIITGVAKGLLYLHEDSHNCIIHRDIKASNILLDDKWTPKIADFGMARLFPEDQSQVNTRVAGTNGYMAPEYVMHGNLSVKADVFSYGVLVLELITGQRNSSFNLDVDALNLLDWAYKMYKKGKSLEIVDSALASTMVGEEVAMCIQLGLLCAQGDPQLRPTMRRVVVMLSRKPGQMQEPTRPGVPGSRYRRPHRHSALSSTVGTSAASDSQTSDSSNNYTTSATGTSSATAEPDPKGKRPMREG 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11378g00001 403 FunFam Cysteine-rich receptor-like protein kinase 10 22 133 - -
Mupr11378g00001 403 Pfam Protein tyrosine and serine/threonine kinase 61 327 IPR001245 GO:0004672|GO:0006468
Mupr11378g00001 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Mupr11378g00001 403 ProSiteProfiles Protein kinase domain profile. 58 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11378g00001 403 FunFam Cysteine-rich receptor-like protein kinase 10 135 340 - -
Mupr11378g00001 403 MobiDBLite consensus disorder prediction 328 403 - -
Mupr11378g00001 403 Gene3D Phosphorylase Kinase; domain 1 20 133 - -
Mupr11378g00001 403 SMART serkin_6 58 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11378g00001 403 MobiDBLite consensus disorder prediction 356 390 - -
Mupr11378g00001 403 Gene3D Transferase(Phosphotransferase) domain 1 135 339 - -
Mupr11378g00001 403 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 383 - -
Mupr11378g00001 403 SUPERFAMILY Protein kinase-like (PK-like) 43 345 IPR011009 -
Mupr11378g00001 403 CDD STKc_IRAK 64 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11378g00001 Mupr-Chr11378 9870 16052 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11378g00001 46 342 Receptor kinase-like Gene Family AT4G11530 51.839 2.34e-109 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr11378g00001 PK_Tyr_Ser-Thr 4.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11378g00001 - - gmx:100795769 727.243