Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11370g00002 AGGCCCAAAGAGCCCAAGTCCAATAGTATTGCAAGTTCATCAAATAAAAAGGTTGAGGGGCGAGACAAACGGTGCCACCAGTTTTCAGTTTCTAGGAGCAGCTTTGAACGGCGACGTTTCATCGAATCTCCGAAACCCTTCATCGCATTGCAAGCAACCATGTCGAGGAGAAAGGTTAGAGAGCCAAAGGAGGAAAACGTGACTCTTGGTCCAGCTGTTAGAGACGGCGAACACGTCTTTGGCGTCGCTCGCATCTTTGCATCCTTCAATGATACATTCATTCATGTCACTGATCTGTCTGGGAGGGAAACACTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAATCATCTCCGTATGCTGCTATGCTTGCAGCACAGGATGTTGCTGTCAGATGCAAGGAACTTGGCATAACGGCTCTTCATATCAAGCTCCGTGCCACTGGTGGAAACAAGACCAAAACACCTGGTCCTGGTGCTCAATCAGCTCTTCGGGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGTATAGAGGATGTGACTCCCATTCCGTCAGATAGCACTCGTAGAAAGAGTGGTAGAAGGGGAAGAAGGCTTTAA 612 0.4837 RPKEPKSNSIASSSNKKVEGRDKRCHQFSVSRSSFERRRFIESPKPFIALQATMSRRKVREPKEENVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAVRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11370g00002 203 Pfam Ribosomal protein S11 81 199 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr11370g00002 203 FunFam 40S ribosomal protein S14 54 203 - -
Mupr11370g00002 203 MobiDBLite consensus disorder prediction 1 15 - -
Mupr11370g00002 203 MobiDBLite consensus disorder prediction 183 203 - -
Mupr11370g00002 203 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 56 196 IPR001971 GO:0003735|GO:0005840|GO:0006412
Mupr11370g00002 203 Gene3D Ribosomal protein S11 54 203 IPR036967 GO:0003735|GO:0005840|GO:0006412
Mupr11370g00002 203 ProSitePatterns Ribosomal protein S11 signature. 168 190 IPR018102 -
Mupr11370g00002 203 MobiDBLite consensus disorder prediction 1 25 - -
Mupr11370g00002 203 SUPERFAMILY Translational machinery components 76 201 - -
Mupr11370g00002 203 Hamap 30S ribosomal protein S11 [rpsK]. 51 200 IPR001971 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11370g00002 Mupr-Chr11370 4133 6311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11370g00002 54 192 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 90.647 6.91e-92 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11370g00002 K02955 - gmx:100499665 266.544