Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11357g00001 ATGACGAAACGACAGAAAATAGTTGCCTATAGAATGACCTCCCCTTTCTTCCAGAACCCAGATTGGGACATGTTGCACCAGTCTTCAGAAATTTTATTCGATTCTTTGTCAAGCAATGCTCTTCTTGACCCTCTCCACGATTCTCTTTCCTTCGACATGGTTGACTTCTCCATGGAACCAACAGAAGGAAACAACAACAACGAATTGGTGGTGAAATCTGAAGTGCAGAATAAGGAAAGGTCATACATAGGTGTGAGGAAAAGGCCTTGGGGAAAATTTGCAGCAGAGATCAGAGACACTACCAGGAATGGCGCAAGGGTTTGGCTTGGAACCTTTGACAGTGCTGAAGCTGCTGCCTTAGCTTATGACCAAGCTGCATTTTCCATGAGAGGCCATAACGCTGTACTCAATTTTCCGGTCAAAACAGTCAAAGAGTCTTTGCAAGATTTTCAATATAGCTGCTGCAATGGTTCTTCTCCTGCACTTGCACTCAAGGAGAGGCACTGCATCCAAAGAAAATTGTCATCAAAGGCTAAAAAGTGTAAAGGAAAAGAGACATCTTCAGAGGCAGCAACACCAAGTGTGATGGTGTTAGAGGACTTGGGAATTGATTATCTTGAGCAACTTCTAAGCATATCCGATCAAAGTTTCGCGTTGAATTGTTCTGAATCCATTCTTGCACTAAACATTGTCCTTCATCCTGCACAGGTTCAATTTTTCACAATCCTTGAACAGTATCTTCCAATAAAAATTCTCAAGACATGCTAA 768 0.4219 MTKRQKIVAYRMTSPFFQNPDWDMLHQSSEILFDSLSSNALLDPLHDSLSFDMVDFSMEPTEGNNNNELVVKSEVQNKERSYIGVRKRPWGKFAAEIRDTTRNGARVWLGTFDSAEAAALAYDQAAFSMRGHNAVLNFPVKTVKESLQDFQYSCCNGSSPALALKERHCIQRKLSSKAKKCKGKETSSEAATPSVMVLEDLGIDYLEQLLSISDQSFALNCSESILALNIVLHPAQVQFFTILEQYLPIKILKTC 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11357g00001 255 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Mupr11357g00001 255 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Mupr11357g00001 255 PANTHER DNA-BINDING DOMAIN 65 214 IPR044808 GO:0003700|GO:0009873
Mupr11357g00001 255 CDD AP2 82 140 IPR001471 GO:0003700|GO:0006355
Mupr11357g00001 255 SUPERFAMILY DNA-binding domain 82 140 IPR016177 GO:0003677
Mupr11357g00001 255 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Mupr11357g00001 255 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Mupr11357g00001 255 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Mupr11357g00001 255 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
Mupr11357g00001 255 FunFam Ethylene-responsive transcription factor 2 80 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11357g00001 Mupr-Chr11357 4464 5784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11357g00001 64 216 AP2-EREBP Transcription Factor Family AT3G23240 53.896 4.63e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mupr11357g00001 AP2 9.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11357g00001 K14516 - gmx:100811486 317.005