Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11355g00002 ATGAGGAAGGTTCAATTGGTTTTGAGAAGAGAGGAGCCTCCAAGAAGGCCAAACAATATAGTAGTGCGGCCTGTGATGAATGTGAGATATTGCGAGTGCCAAAAGAATCAAGCGGTCGGTGTTGGAGGACATGCTGTGGATGGCTGTATGGAGTTCATGCCTAGTGGGGCAGAAGGAACCGATGCAGCTCTGGCTTGTGCTGCATGTGGCTGCCACAAGAACTTCCATAGGAGGGTCGTGCAAAATGCACCTTGTACCATGAAGAAGGTTCTACTGGTTTGGGGAAGAGACGAGCATCCAAGAGACTCAAACAATTCATCATTGCAGACTGTGACGAACGTGAGATATGGAGAGTGCAGAAAGAATCAAGCGCTTAGTGTTGGAGGACATGCTGTGGATGGCTGCAGAGAATTCGTGGCCAATGGGGCAGAAGGGACTACTGCAGCTCTAACTTGTGCTACGTGTGGCTGCCACAGGAGCTTCCACAAGAGGTGTACCATGAAGAAGGTTCTACTGGTTTGGGGAAGAGAGGAGCATCCAAGAAACTCAAACAATTCATCAGTGCGGACTGTTACGAACGTGAGATATGGAGAGTGTCGAAAGAATCAAGCGCTTAGCGTTGGAGGACATGCTGTGGATGGCTGCAGGGAATTCGTGGCCAATGGGGCAGAAGGGACTACTGCAGCTCTAACTTGTGCTACTTGTGGCTGCCACAGGAGCTTCCACGAGAGGGTGGAGCATACTCAACGCAAAGTTGATCGTGATAAT 768 0.5 MRKVQLVLRREEPPRRPNNIVVRPVMNVRYCECQKNQAVGVGGHAVDGCMEFMPSGAEGTDAALACAACGCHKNFHRRVVQNAPCTMKKVLLVWGRDEHPRDSNNSSLQTVTNVRYGECRKNQALSVGGHAVDGCREFVANGAEGTTAALTCATCGCHRSFHKRCTMKKVLLVWGREEHPRNSNNSSVRTVTNVRYGECRKNQALSVGGHAVDGCREFVANGAEGTTAALTCATCGCHRSFHERVEHTQRKVDRDN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11355g00002 256 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 30 79 IPR006456 -
Mupr11355g00002 256 Pfam ZF-HD protein dimerisation region 27 80 IPR006456 -
Mupr11355g00002 256 Pfam ZF-HD protein dimerisation region 193 246 IPR006456 -
Mupr11355g00002 256 Pfam ZF-HD protein dimerisation region 113 165 IPR006456 -
Mupr11355g00002 256 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 196 245 IPR006456 -
Mupr11355g00002 256 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 29 78 IPR006456 -
Mupr11355g00002 256 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 195 244 IPR006456 -
Mupr11355g00002 256 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 115 164 IPR006456 -
Mupr11355g00002 256 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 116 165 IPR006456 -
Mupr11355g00002 256 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 185 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11355g00002 Mupr-Chr11355 4321 16138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11355g00002 1 82 Zinc finger-homeobox gene family AT3G28917 56.977 1.19e-21 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Mupr11355g00002 ZF-HD_dimer 1.1e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11355g00002 - - aew:130754411 133.65