Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11352g00002 ATGGGTATTTTGAGAAAGTCCAGCCCAATAAATAGAACAGATGAGTTTCAGGGTTTTGCATCAGCAGAAGCAGCGGAGGCAGGAACAGAAAGAGAAGAAGCAATGGCCCCGAAGAAGCCGAGAAGCGTGAGGGTGACGAGGAACCCTGATTTGATAAGGGGAATTGGCAAGTACTCGAGGTCGCAGATGTACCACAAGAGGGGCGTCTGGGCTATCAAGGCCAAAAACAACGGCGTTCTTCCTCGTCACGATCCCAAGCCCAAGCCCGAAGCCCCAGTCCAGAAAGAGCCCAAGTTTTACCCCGCCGACGATGTGAAAAAACCCCTGGTTAACAAGCACAAACCTAAACCCGCAAAACTCAGGACTAGTGTTACTCCAGGGACAGTGTTGATCCTGCTTGCTGGGAGATTCAAGGGAAAGAGGGTTGTTTTCCTGAAGCAGCTTCCATCTGGGTTGCTTCTTGTTACAGGCCCCTTTAAGATCAATGGGGTTCCACTCAGAAGGGTGAACCAATCATATGTCATTGGTACATCCACAAAAGTGGATATCTCTGGTGTCAATGTTGATAAACTTGATGACAAGTACTTTTCCAAAGAAGCCAAGAAAAAGAAAACCAAGGGAGAGGGCGAGTTCTTTGAGGCAGACAAGGAGGAGAAAAAAGAGCTTCCTCAAGGAAAGAAAGATGACCAAAAAACTGTGGACACTGCTTTGTTAAAGGCCATTGAGAGTGTTCCAGACCTGAAGACTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAGCCCCATGAACTTGTCTTCTAG 807 0.4746 MGILRKSSPINRTDEFQGFASAEAAEAGTEREEAMAPKKPRSVRVTRNPDLIRGIGKYSRSQMYHKRGVWAIKAKNNGVLPRHDPKPKPEAPVQKEPKFYPADDVKKPLVNKHKPKPAKLRTSVTPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDISGVNVDKLDDKYFSKEAKKKKTKGEGEFFEADKEEKKELPQGKKDDQKTVDTALLKAIESVPDLKTYLGARFSLKAGMKPHELVF 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11352g00002 268 SUPERFAMILY Translation proteins SH3-like domain 122 208 IPR008991 -
Mupr11352g00002 268 MobiDBLite consensus disorder prediction 79 111 - -
Mupr11352g00002 268 PANTHER 60S RIBOSOMAL PROTEIN L6 42 268 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mupr11352g00002 268 MobiDBLite consensus disorder prediction 207 231 - -
Mupr11352g00002 268 Pfam Ribosomal protein L6, N-terminal domain 37 95 IPR005568 GO:0003735|GO:0005840|GO:0006412
Mupr11352g00002 268 Gene3D - 122 206 IPR014722 -
Mupr11352g00002 268 MobiDBLite consensus disorder prediction 1 48 - -
Mupr11352g00002 268 Pfam Ribosomal protein L6e 161 268 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mupr11352g00002 268 FunFam 60S ribosomal protein L6 122 206 - -
Mupr11352g00002 268 MobiDBLite consensus disorder prediction 77 120 - -
Mupr11352g00002 268 CDD KOW_RPL6 116 268 IPR041997 -
Mupr11352g00002 268 MobiDBLite consensus disorder prediction 26 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11352g00002 Mupr-Chr11352 10688 13117 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11352g00002 37 268 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 81.466 7.32e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11352g00002 K02934 - gmx:100784101 401.749