Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11351g00003 ATGCTTCTTATTACAGGCCCCTTTAAGATCAATGGGGTTCCACTCAGAAGGGTGAACCAAGCATATGTGATTGGTACATCCACAAAAGTGGATATCTCTGCTCTCGATGTTGATAAAGTTGATGACTATTACTTTCCGAAGAAAGGCAAGAAAAAGAAAACCAAGGGAGAAGGCAAGTTCTTTGGGGAAAACAATGAGGTTGGTTGGACTATTTCCCTTGTGTTAAATTTGCTTCCGCGAGAAAAGATAGGTGACCAAAAAATTGTCGACAATATTTTGTTGAAGGAAATTGCGAAGACTCCGTACCTGAAGGCTTACTTGGGTGCTAGGTTTTCTTTGAAGGCAGGAATGAAGCCTCATGAG 363 0.4132 MLLITGPFKINGVPLRRVNQAYVIGTSTKVDISALDVDKVDDYYFPKKGKKKKTKGEGKFFGENNEVGWTISLVLNLLPREKIGDQKIVDNILLKEIAKTPYLKAYLGARFSLKAGMKPHE 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11351g00003 121 Gene3D - 1 55 IPR014722 -
Mupr11351g00003 121 PANTHER 60S RIBOSOMAL PROTEIN L6 1 121 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mupr11351g00003 121 CDD KOW_RPL6 2 121 IPR041997 -
Mupr11351g00003 121 Pfam Ribosomal protein L6e 10 121 IPR000915 GO:0003735|GO:0005840|GO:0006412
Mupr11351g00003 121 SUPERFAMILY Translation proteins SH3-like domain 2 57 IPR008991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11351g00003 Mupr-Chr11351 17280 18026 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11351g00003 1 121 Cytoplasmic Ribosomal Protein Gene Family AT1G74060 57.025 2.03e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11351g00003 K02934 - gmx:100784101 146.362