Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11338g00005 ATGGGTTGCGTATGTTCTAAGAGTTCAGCTGTAGAGGACAGCAAGGAAGGTGTCACAAAGAAATTGCAATCGTATAGCACTAGGCCTTCGGAGAATGCTTTGCGGTTGAATTCAACTAGGAGGGTTGAGGAGGGAGGGGTTAAAGATGTGGTAATAGATGGAGGGCATGTGAAAGGTTCATTGATTGACAAGGGCAATGGTTCAGGGAAGTTGTATCATGATCATCATGATGGGAAGAAGAAAATAGAGAAGCATGAATTGGCTGTTGTGGATCATATTGGCCCTGGAGGGGTTCCAAAGGCTATAGAAGGAGAGCAAGTTGCGGCAGGATGGCCTGCGTGGCTTTCTTCGGTTGCTGGCGAAGCTATTAAGGGATGGATACCACGGAGTGCGAATACTTTTGAGAGGTTGCATAAAATTGGGCAAGGAACTTACAGTACTGTTTATAAGGCACGGGATGTGATTAACCAAAAGTTTGTTGCATTGAAGAAAGTGCGCTTTGACAATCTTGATCCTGAGAGTGTCAAGTTTATGGCAAGGGAAATCCATGTTCTGCGTAGACTTGAACATCCCAACATAATAAAATTGGAGGGCTTGATAACGTCCAATATGTCTCGCAGCTTGTACCTTGTTTTTGAGTATATGGAGCATGATCTTACAGGACTTGCATCAAATCCTGACATTAAGTTCTCTGAACCACAGCTGAAATGCTACATGCAGCAACTTCTTAGTGGATTGGATCACTGTCATAGTCATGGTGTCCTCCACCGTGACATAAAGGGCTCAAATCTTCTCATTGACAATAACGGAGTCTTAAAGATTGCCGATTTTGGTTTGGCAAGTTCTTTTGATCCCCACCACAGTGTTCCATTGACAAGCCGAGTGGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCAAATCATTATGGGGTTGCAGTGGATTTGTGGAGCACTGGTTGCATACTGGGGGAACTATATACTGGAAGACCCATTTTGCCAGGAAAAACGGAGGTTGAGCAGTTGCATCGGATTTTTAAACTTTGTGGCTCACCATCTGACGACTATTGGCTTAAATTGCGGTTGTCACATTCAACAGTATTCAGGCCGCCACACCATTATAGGCGATGTATTGCAGATACATTTAAGGATTACCCGTCTACTGCATTAAAGCTTATAGAGACCCTACTTTCTGTAGAGCCAGCACATCGAGGGACTGCAGCAGCTGCTCTGAAAAGTGAGTTCTTTACATCAGAGCCTCTGCCTTGTGAACCATCAAGTTTACCAAAATATGCTCCCTGCAAGGAGATTGATGCTAAACTACGGGAAGAAGCCAGAAGGCAAGGAGCTCTTGGAGGAAGGGATCAAAAAGTTGCCTCTGGAGTTAGACAAGAAAAAGGACTTAGGGCCAATGTCACAGCAAAAGACAATGCTGACCCTGGCTTATCGCAAGGACGTTATTCCAGCTCAAAGAATCGAAGTGAATTATACAACCCTCATAGGAAACCGGTGTCTGGGATTCTGGTTTTCCCTCACAAACAGTCGGAAGATGTTAAAGAAACGGAAAGTAATTTCTCTGGGCATCTTTATAAGAGGTCTTCACATTCTGGTCCATTGGTTCCAGGTTCTGTTTGGGCAAAAGGTGGGAAGGGAGTTGATGATATGCCTCCTGCTTCAAACAAAGGGAACTTATCAAAACTATCTGGGCTAGTGGCATCCAGGACTTTGTTGTCCGAAGATCAGGAGGATAAACAAGTTCACTTGCACCACAGAAAACCAATTGAAGTAAGACAATCTGCAGAGTCAACTAGTGGATCCGAGTCCAGAAGAAGGCAGGATCAAATTGAAAATAGAAGGGTCCCTGCTGAAAAATCAACACCGGGCGGACGCGAGTCCATGGGAAACAAGATATACCTTTCAGGTCCATTAATGGTTTCGACAAGCAACATGGATCAGATGCTCAAAGAGCATGATCGAAAGATCCAAGAGTTTTCAAGACGAGCGAGAATTGACAAGTCAAGAGCAAGAGGTGAGAAAGTTCGTGCACAGCGGAAGTAG 2064 0.4448 MGCVCSKSSAVEDSKEGVTKKLQSYSTRPSENALRLNSTRRVEEGGVKDVVIDGGHVKGSLIDKGNGSGKLYHDHHDGKKKIEKHELAVVDHIGPGGVPKAIEGEQVAAGWPAWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVINQKFVALKKVRFDNLDPESVKFMAREIHVLRRLEHPNIIKLEGLITSNMSRSLYLVFEYMEHDLTGLASNPDIKFSEPQLKCYMQQLLSGLDHCHSHGVLHRDIKGSNLLIDNNGVLKIADFGLASSFDPHHSVPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSDDYWLKLRLSHSTVFRPPHHYRRCIADTFKDYPSTALKLIETLLSVEPAHRGTAAAALKSEFFTSEPLPCEPSSLPKYAPCKEIDAKLREEARRQGALGGRDQKVASGVRQEKGLRANVTAKDNADPGLSQGRYSSSKNRSELYNPHRKPVSGILVFPHKQSEDVKETESNFSGHLYKRSSHSGPLVPGSVWAKGGKGVDDMPPASNKGNLSKLSGLVASRTLLSEDQEDKQVHLHHRKPIEVRQSAESTSGSESRRRQDQIENRRVPAEKSTPGGRESMGNKIYLSGPLMVSTSNMDQMLKEHDRKIQEFSRRARIDKSRARGEKVRAQRK 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11338g00005 687 FunFam probable serine/threonine-protein kinase At1g54610 121 216 - -
Mupr11338g00005 687 CDD STKc_CDK9_like 134 418 - -
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 474 501 - -
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 661 687 - -
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 579 599 - -
Mupr11338g00005 687 FunFam probable serine/threonine-protein kinase At1g54610 217 457 - -
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 531 640 - -
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 661 680 - -
Mupr11338g00005 687 PANTHER CELL DIVISION PROTEIN KINASE 132 424 - -
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 563 577 - -
Mupr11338g00005 687 Gene3D Phosphorylase Kinase; domain 1 121 216 - -
Mupr11338g00005 687 SUPERFAMILY Protein kinase-like (PK-like) 127 425 IPR011009 -
Mupr11338g00005 687 Gene3D Transferase(Phosphotransferase) domain 1 217 456 - -
Mupr11338g00005 687 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Mupr11338g00005 687 ProSiteProfiles Protein kinase domain profile. 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11338g00005 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mupr11338g00005 687 MobiDBLite consensus disorder prediction 606 627 - -
Mupr11338g00005 687 SMART serkin_6 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11338g00005 687 Pfam Protein kinase domain 134 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11338g00005 Mupr-Chr11338 8866 14309 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11338g00005 126 460 Core Cell Cycle Gene Families AT5G10270 47.578 3.60e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr11338g00005 Pkinase 3.8e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11338g00005 - - gmx:100807590 1226.08