Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11332g00002 ATGGCAGAAGAGGACCCAAAGCCTCTCAACTACATCCCCGAGGTTATACTGAAGAAGAGGAAAAGCAGAGAAGCATGGGGCTTGACAAAAAAAGAACAGTTCAAGCGCAAAAATTCCCAATCCATCAAGAAACCCGAGGATTTCGTCCACGAATACCGCAACAAGGAGGTGGACCTTATCAGAATGAAACGGAGGGTGAAGAGGAAAGTGCCTCAAGCTAACTCCTCCAACGCGTTGATAATCATCAGGATACAGGGGAAAACGGACATGCATCCCAAGACGAGGAAGGTTTTGTACAGCTTAGGGTTAAGGAGAATTTTCAGTGCTGTATTTGTGAAGCCGAGTGAGGGAGTAATGGCCAAGCTGCAGAGGGTGGAACCATATGTGACCTATGGATATCCAAATCTTAAAACCATAAAGGAGCTAATTTACAAGAAAGGACATGCGAGGATGGATAAGCGAAAAGTTCCCTTGACGGACAATAACATTATTGAGCAGGAATTAGGAAAATCTGGTATTGTATGCATAGAAGACATGGTGCATCAGATTTATAATGTTGGTCCACACTTTAAGGAAGTTATCAGATTTATGTGGCCCTTTGAGCTCAACAAGCCAGCTGAAGGATTGAAAGGATCAAAAACCCTGTACAAGGAAGGTGGAGACACAGGGAACCGAGAGGATCTCATCAATGAACTAATCAATAAAATGAATTAA 714 0.4314 MAEEDPKPLNYIPEVILKKRKSREAWGLTKKEQFKRKNSQSIKKPEDFVHEYRNKEVDLIRMKRRVKRKVPQANSSNALIIIRIQGKTDMHPKTRKVLYSLGLRRIFSAVFVKPSEGVMAKLQRVEPYVTYGYPNLKTIKELIYKKGHARMDKRKVPLTDNNIIEQELGKSGIVCIEDMVHQIYNVGPHFKEVIRFMWPFELNKPAEGLKGSKTLYKEGGDTGNREDLINELINKMN 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11332g00002 237 FunFam 60S ribosomal protein L7-1 isoform A 183 237 - -
Mupr11332g00002 237 SUPERFAMILY Ribosomal protein L30p/L7e 79 237 IPR036919 -
Mupr11332g00002 237 Pfam Ribosomal protein L30p/L7e 79 129 IPR016082 -
Mupr11332g00002 237 NCBIfam 60S ribosomal protein uL30 19 237 IPR005998 GO:0000463|GO:0003735|GO:0022625
Mupr11332g00002 237 PANTHER 60S RIBOSOMAL PROTEIN L7 9 237 IPR039699 -
Mupr11332g00002 237 CDD Ribosomal_L7_archeal_euk 79 237 IPR035808 -
Mupr11332g00002 237 Gene3D - 78 237 IPR036919 -
Mupr11332g00002 237 FunFam 60S ribosomal protein L7 78 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11332g00002 Mupr-Chr11332 21579 23937 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11332g00002 1 237 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 55.061 2.40e-91 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11332g00002 K02937 - gmx:100500005 427.172