Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11323g00001 ACACGAGAGTTCTTGAGAGTAAGAGCTAGCCAAGACCCTTTTGGTGTTGAGGAAATCAAAGAGAAAATGGGTAGTTGTGGAAGAGAAGGAGCAGTGAGGCAATATATAAGATCCAAGGTTCCTCGTTTAAGGTGGACTCCTGAGCTGCACCGTTGCTTTGTTCATGCTATTGATAGCCTTGGAGGACATCATAAGGCTACTCCAAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACATGTCAAGAGCCATCTTCAGATGTACAGAAGCATGAGGGGTGAGTTGAGCAGACAAGGTAGGACACCCTCCCAACACAGAAACCAATCTTTTGATGAGCATGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTGAGTACTCATGTTCGAAACCAATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGTAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCGATCTCAGAGAGCCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGCTTTTATGATTATCTGCAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTATGTGAACCTTCAACATGGCAGAAACAACCCCCTTCCACTCTGCTACCACATTTTCCCAACCTTACTTCATTCAAATGTCCTAACCAACAATCTCATTTCCTCCAGGTTAGTAAATTAAATGAAGGAAAGAGCACTCCACAGTCACATGCAATTAATGTAGTTGTGAACACTGAGAGAGGTATTGCAGAAGTTGAAGATGTAGGAGGGTACGAATTGTCGTTGTCGCTCACATTGCCTCAGAGAAGTAATGGTTCTTCGGCAAGTGAAATCAGTGAAGCAATCTCATCATGCCCTGGGTTTAGCAACTACAAGGACTGCTCTAGTGCATCCAACGTCAAAGAAAGAATTAATTTGGACCTATCTTTGGCCCTATGTGGCAATTGA 984 0.438 TREFLRVRASQDPFGVEEIKEKMGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGELSRQGRTPSQHRNQSFDEHDDGCVDEVNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVPNPYCFYDYLQPMAEHKGIKELCEPSTWQKQPPSTLLPHFPNLTSFKCPNQQSHFLQVSKLNEGKSTPQSHAINVVVNTERGIAEVEDVGGYELSLSLTLPQRSNGSSASEISEAISSCPGFSNYKDCSSASNVKERINLDLSLALCGN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11323g00001 327 NCBIfam myb-like DNA-binding domain, SHAQKYF class 41 94 IPR006447 GO:0003677
Mupr11323g00001 327 FunFam Myb family transcription factor 39 97 - -
Mupr11323g00001 327 MobiDBLite consensus disorder prediction 97 121 - -
Mupr11323g00001 327 Gene3D - 40 96 - -
Mupr11323g00001 327 Pfam Myb-like DNA-binding domain 43 93 IPR001005 -
Mupr11323g00001 327 SUPERFAMILY Homeodomain-like 39 95 IPR009057 -
Mupr11323g00001 327 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 25 122 IPR046955 GO:0003700
Mupr11323g00001 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 97 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11323g00001 Mupr-Chr11323 2933 6290 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11323g00001 23 99 G2-like Transcription Factor Family AT1G14600 73.171 8.99e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mupr11323g00001 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11323g00001 - - gmx:100787188 450.669