Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11321g00004 ATGCAACGGCGTTTTCTAGACACGGAGCTGAGCGTGCCACCGTCGTACGGCAACAACACGCGCGACTCGTTCATCAGCGACGCGAACTTTGACACCAACATGGTCATCATTCTGGCGGCGCTGCTGTGCGCGCTGATATGCGCGCTGGGGCTGAACTCCATCGCGCGGTGCGCCCTGCGGTGCGGGCGGCGGTTCGGCGACGAGACACCGGAGCAGGCGGCGGCGCGGCTGGCGGGGACGGGGCTGAAGAGGCGCGAGCTGAGCCGGATCCCGGTGGCCGTGTACGGCGGCGGCGAGGACGTTCCGGCGACGGAGTGCCCCATATGCCTCGGCGAATTCGAGAAAGGGGACAGGGTCCGAATGCTGCCCGAGTGCAACCACGGGTTCCACGTCGGCTGCATTGACACGTGGCTCTTGTCGCACTCGTCGTGCCCCAATTGTCGCCATTCGCTGCTTCAGAAACCCGCCGGAGGAGCCGCGCCGGAAAGTGGGTCCGGCCGACGGAGCAACGTCGTCGTGGTCGTCGACCAGGCAAGTTGA 540 0.6648 MQRRFLDTELSVPPSYGNNTRDSFISDANFDTNMVIILAALLCALICALGLNSIARCALRCGRRFGDETPEQAAARLAGTGLKRRELSRIPVAVYGGGEDVPATECPICLGEFEKGDRVRMLPECNHGFHVGCIDTWLLSHSSCPNCRHSLLQKPAGGAAPESGSGRRSNVVVVVDQAS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11321g00004 179 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 155 IPR013083 -
Mupr11321g00004 179 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 24 154 - -
Mupr11321g00004 179 SMART ring_2 106 147 IPR001841 -
Mupr11321g00004 179 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Mupr11321g00004 179 SUPERFAMILY RING/U-box 97 154 - -
Mupr11321g00004 179 CDD RING-H2_EL5-like 105 148 - -
Mupr11321g00004 179 Pfam Ring finger domain 105 148 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11321g00004 Mupr-Chr11321 21378 21917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11321g00004 1 175 C3H Transcription Factor Family AT3G10910 52.973 3.12e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11321g00004 K19040 - gmx:100814602 296.589