Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11315g00001 GTGAAAGTCTACCTTGAACGCCGATCACTTGTACATTCACTAAATGACGCCAAAACAGCTGTTGATGACTTGAATATGCTTGCTTCTGTAATTGTCCTTATTGTGATCATTATTGTGTGGCTTCTTATAATGGGTTTCTTAACAACTAACGTTCTTGTCTTTATTTCATCCCAAGTTTTACTTGTGGCCTTTATGTTTGGCAACACAGCCAAGACTGTATTTGAAGCTATTATATTTGTTTTTGTGATTCACCCATTTGATGTTGGTGATCGCTGTGTCATCGATGGTGTTCAGATGATAGTGGAAGAGATGAACATACTCTCTACAGTCTTTTTGAGATATGACAATGAAAAGATATTCTATCCAAATTCAGTTCTGGCAACCAAGCCAATCAGCAACTTCTGTAGGAGTCCAGAAATGAGTGATTCAGTTGAATTTTCTGTTGATGTTTCTACTTCTATTGAAAGTATTGGAGCTTTAAAGGCCAAGTTAAAAGCATATTTGGAGAGTAAGCCTCAACACTGGAGCCCCAACCACAGCGTATTGGTTAAGGATATTGAGGATTTAAATACGATGAAAATGGGTCTATTTATTACTCACACCATAAATTTTCAGAATTATGGGGATAAGAGCAGCCGAAGATCTGAATTAGTCCTGGAGTTAAAGAAAATTCTTGAAGACCTTAATATTAAATATCATCTGCCGCCACAAGAAATTCATCTCAGTTACACTATTGGTTTCCCCCATAGTTCTATCCAGTATGACATCAAAGATGATATTGATGGTTTATTGCGTTTTTGGATAGCCCTTCTGAACAGTCATGCTTATCTTGTTTTCATGAGGGTGGAAGAGGCCAGAAGGAACTTGATCACTTAA 876 0.3721 VKVYLERRSLVHSLNDAKTAVDDLNMLASVIVLIVIIIVWLLIMGFLTTNVLVFISSQVLLVAFMFGNTAKTVFEAIIFVFVIHPFDVGDRCVIDGVQMIVEEMNILSTVFLRYDNEKIFYPNSVLATKPISNFCRSPEMSDSVEFSVDVSTSIESIGALKAKLKAYLESKPQHWSPNHSVLVKDIEDLNTMKMGLFITHTINFQNYGDKSSRRSELVLELKKILEDLNIKYHLPPQEIHLSYTIGFPHSSIQYDIKDDIDGLLRFWIALLNSHAYLVFMRVEEARRNLIT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11315g00001 291 SUPERFAMILY Sm-like ribonucleoproteins 75 134 IPR010920 -
Mupr11315g00001 291 Gene3D - 85 134 IPR023408 -
Mupr11315g00001 291 FunFam Predicted mechanosensitive ion channel 85 134 - -
Mupr11315g00001 291 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 1 243 IPR016688 -
Mupr11315g00001 291 Pfam Mechanosensitive ion channel 27 231 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11315g00001 Mupr-Chr11315 381 2313 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11315g00001 1 242 Mechanosensitive Ion Channel Family AT5G12080 55.785 3.46e-98 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11315g00001 K22048 - gmx:100777332 420.624