Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mupr11312g00002 | ATGAGTGTGAGATCCAAAAACTTGAATTGTGTTTTCTATGCAGATTCGTACCATCCCATTCAAGCTGGCAGCATCGACGGCACTGATGTTGTTCCTCACGACAACGCCGTTTATCGCGCTCAACTCTGTTCCTCTATTGGCCTCTATGACCCATTTGGTGATCCTAAGGCCACTGGAGACCCTCATTGCACTCTCTTCGTGGCTCGCCTCTCTCGCCTCACCACTGACGATACGCTCCGCAAGGTTATGAGTAAGTATGGTCGGGTGAAGAACTTGCGCTTGGTCAGGGACATAGTGACAGGAGCTTCTCGTGGTTATGCTTTTGTTGAATACGAAACTGAAAGGGAGATGCGACGAGCATATATGGATGCTCATCATTTGATTGTTGATGATAGTGAAATCATAGTGGATTACAACAGACAGCAATTGATGCCTGGATGGATTCCTAGAAGGTTAGGTGGTGGTCTTAGTGGTAAAAAGGAATCGGGACAACTTCGTTTTGGGGGAAGAGAGAAACCATTTCGTGCACCCCTGAAACCAATCCCATTCGAGGAGTTGAAGAAGCTTGGCATCCCACCTCCACCTGAGGGAAGATATATGTCGCGCTTTCAGGTGCCATCCCCCCCTAGAAGAGAAAGGAACCTTTCAGACAGGGAAGAAGAGTCTCGTAGTCATAGAAGAAAGGGTTCTAAAGACATTGAGGAAGGGCACTACAGAAGGAGTTCAAGTCACCGAAGGAGCTCGTTGGAGAGGAGTGGTCGTTACCATGACAGGGGTTCTTCGGAGAAAGAACATCATTCTCGGAAAAGGAAAGAAAGAGATGAACGATCTCGCAGGCGGGAGAAATATAGTCGCCATTCCCCTCACAAGGACTAA | 876 | 0.4795 | MSVRSKNLNCVFYADSYHPIQAGSIDGTDVVPHDNAVYRAQLCSSIGLYDPFGDPKATGDPHCTLFVARLSRLTTDDTLRKVMSKYGRVKNLRLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYNRQQLMPGWIPRRLGGGLSGKKESGQLRFGGREKPFRAPLKPIPFEELKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREEESRSHRRKGSKDIEEGHYRRSSSHRRSSLERSGRYHDRGSSEKEHHSRKRKERDERSRRREKYSRHSPHKD | 291 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mupr11312g00002 | 291 | PANTHER | U1 SMALL NUCLEAR RIBONUCLEOPROTEIN 70 KD | 12 | 230 | - | - | |
Mupr11312g00002 | 291 | SUPERFAMILY | RNA-binding domain, RBD | 49 | 169 | IPR035979 | GO:0003676 | |
Mupr11312g00002 | 291 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 65 | 134 | IPR000504 | GO:0003723 | |
Mupr11312g00002 | 291 | MobiDBLite | consensus disorder prediction | 211 | 281 | - | - | |
Mupr11312g00002 | 291 | FunFam | Small nuclear ribonucleoprotein U11/U12 subunit 35 | 50 | 171 | - | - | |
Mupr11312g00002 | 291 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 63 | 141 | IPR000504 | GO:0003723 | |
Mupr11312g00002 | 291 | Gene3D | - | 50 | 171 | IPR012677 | - | |
Mupr11312g00002 | 291 | MobiDBLite | consensus disorder prediction | 152 | 291 | - | - | |
Mupr11312g00002 | 291 | CDD | RRM_snRNP35 | 59 | 152 | IPR034146 | - | |
Mupr11312g00002 | 291 | SMART | rrm1_1 | 64 | 137 | IPR000504 | GO:0003723 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mupr11312g00002 | 63 | 139 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 29.870 | 3.74e-06 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mupr11312g00002 | K13155 | - | gmx:100814109 | 468.388 |