Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11311g00001 ATGCGGCCTAGAAATATATTGCAAGCGGGGTTCCCGACTCTATTTGATTTTGGGAACCCGCGTACAGGATTGAGTGTCAAAACAATCATGCAACACATTAAGCATGAAAATTTTGTGTCATCTGGTAAAGAAGATCCAGAAGATGAAGAAAAATGTGTTATATGTCAGGAGGAATATGAAGATGGAGAAGAAATTGGGAAGTTGGATTTATGTGTGCACAAGTTTCACGTTCCTTGCATCACACAATGGCTCATGAACAAGAACGCATGCCCAATCTGCCAACGAACTGCGTTGACAATGAACAATGTTGAAAATGAAGCTGGAGCTAGTTAA 333 0.4054 MRPRNILQAGFPTLFDFGNPRTGLSVKTIMQHIKHENFVSSGKEDPEDEEKCVICQEEYEDGEEIGKLDLCVHKFHVPCITQWLMNKNACPICQRTALTMNNVENEAGAS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11311g00001 110 ProSiteProfiles Zinc finger RING-type profile. 52 94 IPR001841 -
Mupr11311g00001 110 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 98 IPR013083 -
Mupr11311g00001 110 SMART ring_2 52 93 IPR001841 -
Mupr11311g00001 110 Pfam Ring finger domain 51 94 IPR001841 -
Mupr11311g00001 110 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 18 98 IPR045191 GO:0061630
Mupr11311g00001 110 SUPERFAMILY RING/U-box 31 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11311g00001 Mupr-Chr11311 3131 4806 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11311g00001 18 98 C3H Transcription Factor Family AT2G15530 45.238 2.80e-17 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11311g00001 - K10635 ccaj:109791527 125.561