Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11305g00002 ATGGAAGCTCTTCTTCTGTTGTTGTTGTTGCTTTGTTATTTTATTCTCTGTGCTTCTGGCACCGATGTTGAATACGACAATTGCAACTGTGACGACGGGGAAGGAATTTGGAGCATACATAGTATACTCGTTGGCCAAAAAGTCAGCGATTTTTTCATTGCTGTTGCGTATTTCTCCATTCCCATTGAACTCCTTTACTTTGTTAGCCGTTCAAACGTTCCATTCAAATTGCTCTTCCTCCAATTTATTGCCTTCATAGTGCTATGTGGCTTGACCCATTTACTCAATGCGTATTCTTATCATGGTCCTCCCTCCTTCCAGTTGTTGCTCTCCCTAACAGTAGCTAAATTTCTCACTGCTCTTGTTTCCTGTGCAACTGCTTTGACCCTTCCCCCTCTCATCCCTCTTCTCCTCAAAGTCAAAGTTAGGGAGCTCTTCCTAAGGCAGAATGTCATGGAGTTGGGGCAAGAGGTTGGGATGATGAAGAAACAGAAGGAGGCAAGCTCGCATGTGAGGATGCTCACTAGGGAAATTAGGAAGTATCTTGATAAGCATACTATCTTGTACACCACCCTTGTTGAGCTTTCAAAGGCATTGGAATTGCATAATTGTGCAGTTTGGATGCCGAATGAGGACCGGTCAGAGATGCACTTAACCCATGAGTTGAAAGCAAATTCTGTCAAGAATTTTCAGAATTCTATTCCTGTGAATGACCTGGATGTATTGGAGATAAGAAAAAGTAAGGGGGTGAAGATTTTAGGGCCAGATTCTGTTCTAGGAGCTGCAAGTAGCGGTGGATCTGGGGAGTTGGGTGCTGTGGCAGCTATTCGCATGCCGTTACTTCATGTATCAAATTTCAAAGGAGGGACGCCGGAGTTGGTTGACACGTGTTATGCTATACTGGTTTTGGTTCTTCCGAGTTCAAGCTCTAGGGTTTGGACCTACCATGAGATGGAGATAGTTGAAGTGGTTGCTGATCAGGTGGCTGTTGCCCTGTCTCATGCATCTGTTCTTGAAGAGTCTCAGCTAATGAGACAGAAGCTGGAAGAACGAAACCGAGCGTTGCAGCAGGCTAAAAAGAATGCGATGATGGCCAGCCAGGCAAGGAAGTCATTTCAGAAGGTAATGAGTCATGGGATGCGGAGGCCTATGCATTCTATTCTGGGAATGCTTTCATTGTTTCAAGAGGATAATATTAGGTCTGACCAGAAGATTATTGGTGATACAATGTTGAAAGTTGGCTATGTGCTTTCAAGCTTGATTAATGATGTAATGGAGATTTCAGAAGATGAGAAGGGAGGCTTCCGGTTAGAGATGAAACCTATCTTTCTGCGTTCCATGATGAGGGAAGCTGCTTGCATTGCCAAGTGCTTGTGTGTATATGAAGGTTTTGGTTTTGAAATTGATGTCCAGACGTCTTTGCCTGAAAAGGTTATGGGTGATGAAGCAAGGACTTTTCAAGTAATTTTACACATGATTGGCTATTTATTGAACATGAATAAGAAAGGGATTCTCAGTTTTCGAGTTTTTCTTGAAAATGACGGTGGAGATAAGGATGATAAAAATTTTGGAATATGGAAATCAAGCAATCAAAATGAGTATGTACATATAAAATTTGATTTTCAGATTAATGATATTTCTCAGTCAGAGGAAGCAATTTCAGCAATTTCAGCAATACATTATACTGGTAGGAGGCAACACTACAACAATGAACCTAAGGAGGGCCTGAGCTTCAGCATGTGCAAGAAGTTAGTACAGATGATGCAAGGTAATATATGGATATCACCAAACTCCCCAGGTTTGGTGCAAGGCATGATACTTGTTCTCAAGTTTCCAATAGGACCATCACTTCAAAAATCAATATTTGCATCCAAAGATTCTTTGAACTCACAGTTCAGAGGCCTTAAAGTTGTGTTAGCTGAGGACGATGGTGTAAACAGGACTGTGACCAAGAAGCTACTTGAGAAACTTGGGTGTCAAGTAACTGCTGTTTCGTCAGGGTTTGAGTGCTTGAGTGCTATAAGTGGCTCTGGTAACTCATTCAGAATCATCCTGTTGGATCTTCATATGCCTGAAATGGATGGTTTTGAAGTGGCAAAGAGGATCCGAAAGTTCCATAGTGGTAGTTGGCCCTTGATTATAGCCCTCATAGCAAGTGCAGAAGAACATGCGAGAGAAAAATGCCTACTCGCAGGAATCAATGGATTGATCCAAAAACCTATCGTCCTTCATCAGATAGCTGATGAACTTAGAACAGTCCTACAAAGAGCAGGTGAAAAACTGTGA 2286 0.4213 MEALLLLLLLLCYFILCASGTDVEYDNCNCDDGEGIWSIHSILVGQKVSDFFIAVAYFSIPIELLYFVSRSNVPFKLLFLQFIAFIVLCGLTHLLNAYSYHGPPSFQLLLSLTVAKFLTALVSCATALTLPPLIPLLLKVKVRELFLRQNVMELGQEVGMMKKQKEASSHVRMLTREIRKYLDKHTILYTTLVELSKALELHNCAVWMPNEDRSEMHLTHELKANSVKNFQNSIPVNDLDVLEIRKSKGVKILGPDSVLGAASSGGSGELGAVAAIRMPLLHVSNFKGGTPELVDTCYAILVLVLPSSSSRVWTYHEMEIVEVVADQVAVALSHASVLEESQLMRQKLEERNRALQQAKKNAMMASQARKSFQKVMSHGMRRPMHSILGMLSLFQEDNIRSDQKIIGDTMLKVGYVLSSLINDVMEISEDEKGGFRLEMKPIFLRSMMREAACIAKCLCVYEGFGFEIDVQTSLPEKVMGDEARTFQVILHMIGYLLNMNKKGILSFRVFLENDGGDKDDKNFGIWKSSNQNEYVHIKFDFQINDISQSEEAISAISAIHYTGRRQHYNNEPKEGLSFSMCKKLVQMMQGNIWISPNSPGLVQGMILVLKFPIGPSLQKSIFASKDSLNSQFRGLKVVLAEDDGVNRTVTKKLLEKLGCQVTAVSSGFECLSAISGSGNSFRIILLDLHMPEMDGFEVAKRIRKFHSGSWPLIIALIASAEEHAREKCLLAGINGLIQKPIVLHQIADELRTVLQRAGEKL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11305g00002 761 CDD HisKA 366 428 IPR003661 GO:0000155|GO:0007165
Mupr11305g00002 761 ProSiteProfiles Histidine kinase domain profile. 375 615 IPR005467 -
Mupr11305g00002 761 Coils Coil 338 368 - -
Mupr11305g00002 761 PIRSF Ethylen_sen_hybr_HK 1 761 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mupr11305g00002 761 Pfam Response regulator receiver domain 637 749 IPR001789 GO:0000160
Mupr11305g00002 761 Gene3D - 167 332 IPR029016 -
Mupr11305g00002 761 SUPERFAMILY CheY-like 631 756 IPR011006 -
Mupr11305g00002 761 CDD HATPase_ETR2_ERS2-EIN4-like 474 609 - -
Mupr11305g00002 761 SMART REC_2 635 750 IPR001789 GO:0000160
Mupr11305g00002 761 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 437 613 IPR036890 -
Mupr11305g00002 761 SMART gaf_1 183 342 IPR003018 GO:0005515
Mupr11305g00002 761 Gene3D - 333 431 - -
Mupr11305g00002 761 Pfam GAF domain 185 332 IPR003018 GO:0005515
Mupr11305g00002 761 FunFam Ethylene receptor 633 757 - -
Mupr11305g00002 761 SUPERFAMILY GAF domain-like 186 335 - -
Mupr11305g00002 761 FunFam Ethylene receptor 4 335 429 - -
Mupr11305g00002 761 Gene3D - 635 760 - -
Mupr11305g00002 761 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 758 - -
Mupr11305g00002 761 ProSiteProfiles Response regulatory domain profile. 636 754 IPR001789 GO:0000160
Mupr11305g00002 761 Gene3D - 432 614 IPR036890 -
Mupr11305g00002 761 SMART HisKA_10 368 433 IPR003661 GO:0000155|GO:0007165
Mupr11305g00002 761 CDD REC_ETR-like 635 750 - -
Mupr11305g00002 761 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 353 433 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11305g00002 Mupr-Chr11305 11314 15769 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11305g00002 22 759 Miscellaneous Gene Families AT3G04580 62.617 0.0 919
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr11305g00002 GAF 1.8e-11 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11305g00002 K14509 - gmx:100101892 1310.43