Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11300g00004 TCTGTCTGCACTCAGTCGAGACCAAGCCGGATTATCTCTGCCGAGATCATCTCGGCTCAGTCTCTGCCGAGAGCTACTCAGCCAGTGCCGAGGAGAGTCAACACTTTACATCTCAGGCTCTACATCACTTCATTTAACACCAAATCACAACTGAACGCACTTTATCTCAACCTTGATAGGTGTGAGAATCTTAAGAAATTCTCAATAATATCAAAGAATATGTTAGAATTGAGATTAGGATGTACGAAGATCCAAGTATTGCTCTCATCATTTGCAGATCAAAGCAAGCTTAAATGGCTACATCTAATGGGAAATGACATTGAGAGGTTACCTTCATCCTTCAACAAACTTACGCAATTGCTACATCTACACATAATCTTTTGTAAGATGCTTTATACACTAGCAGAGCTCCCCCTATCCCTTAAAATTCTAGATGTCACAAACTACAAATCCCTTCAGATTCTACCAAATCTTCCCCCATCCCTTGAAACTCAAAATGCCAAATACTGCTCTATACTTCAGAGTCTACCAAAGCTTCCCATATCCCTTAAAACTTTAGAGATCATAGACTGCATATCCATACAAAATCTACCAAAGCTTCCCTCGTCCCTTGAAACTCTAAATGCCAGATATTGCTTATACTTCAGACTTAGCTCATCCCTTAAAACTCTAGATGTTACAGACTGCAAATCACTTCAAAGTCTACCAGAGCTTTCCTCATACCTTGAAACTCCAAATGCCAAGTATTGCTCTATGCTTCAAAGTCTACCAAAGCTTCCCTTGTCCCTTAAAACTCTAGATGTCATAGATTGCAAATCATTTCAGAGTCTACCAAAACTTCCTTTGTCTCTTGAAACTCTAAATGTTGGACATTGCTCTATACTTCAAAGTCTACCGGAGCTACCACCATCCCTTAAAACTCTAGATCGCACAGACTGCAAATCACTT 948 0.3987 SVCTQSRPSRIISAEIISAQSLPRATQPVPRRVNTLHLRLYITSFNTKSQLNALYLNLDRCENLKKFSIISKNMLELRLGCTKIQVLLSSFADQSKLKWLHLMGNDIERLPSSFNKLTQLLHLHIIFCKMLYTLAELPLSLKILDVTNYKSLQILPNLPPSLETQNAKYCSILQSLPKLPISLKTLEIIDCISIQNLPKLPSSLETLNARYCLYFRLSSSLKTLDVTDCKSLQSLPELSSYLETPNAKYCSMLQSLPKLPLSLKTLDVIDCKSFQSLPKLPLSLETLNVGHCSILQSLPELPPSLKTLDRTDCKSL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11300g00004 316 SMART LRR_bac_2 260 280 - -
Mupr11300g00004 316 SMART LRR_bac_2 94 113 - -
Mupr11300g00004 316 SMART LRR_bac_2 218 238 - -
Mupr11300g00004 316 SMART LRR_bac_2 281 301 - -
Mupr11300g00004 316 SMART LRR_bac_2 138 158 - -
Mupr11300g00004 316 SMART LRR_bac_2 159 179 - -
Mupr11300g00004 316 Gene3D Ribonuclease Inhibitor 20 129 IPR032675 -
Mupr11300g00004 316 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 43 314 - -
Mupr11300g00004 316 Gene3D Ribonuclease Inhibitor 130 216 IPR032675 -
Mupr11300g00004 316 Gene3D Ribonuclease Inhibitor 217 315 IPR032675 -
Mupr11300g00004 316 SUPERFAMILY L domain-like 29 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11300g00004 Mupr-Chr11300 18861 19916 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11300g00004 29 316 WRKY Transcription Factor Family AT5G45050 24.458 1.69e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11300g00004 - - ccaj:109788083 267.7