Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11293g00002 ATGGACGAGGAGGAACGTGATGAAGGAAGTTCGGTGGTTGTTGAGCAAACACCGGAGCAACTGGTGGCCAGGGCCATAGCCCCGGTGAAGAAGGATTTCCTCCGTCCTCCTCCTGTTCGGGCTTCCTCTCCAAACGACGACGTTTCTATTCCCAACGATACTAAAACCTCCGTTCTTGCGAAGGAGAAGAAGTCTAAACGCCAACTCAAACGCGAACGTCGTCAGGAACAGAAGTCAGCACGAAACCTATGTCCGGAAATTGCGAAGAGCGGGGATGTTAGTTCATGTCCTTATAAAGACAAGTGTCGTTTCAGCCATGATTTGGAAGGCTTCAAGGCACAGAAACCGGCTGATCTAGAGGGACAATGTCCTTTCCTTAAATCTGGAGGCTCTTGCCCTTACGGGTTAGCGTGTAGATTTTCAAGTACGCATGAGGATGGTGTGCCTTCTGCCAATCTCAAGAATAGTTTCGAGGTGAATGGGTTGAGCAAAGATGTTCAAAAGCTCTTGTGGAAAAATAAGATGAACTTCTCCAAGGCCGATGCCAAACTCAAAAGTCTTGGCCTCATGGGACCCTCTAAGTCAAAAAGGAATGACATGGAAAATAAAGATGGAGGTGACACTGGTTCAAATAAGTGTGATCATTCTGATGACAGTGGCTCTTGTGTTGTTACCTCTGATTCAGGTTCTAAGTTGGAATGCCCTGCAGAAGTTATGAATGATGATGACAATGACATAGATGGAAATTCTGAATCTGATGTACTTTGTCCCCAGAAGAGAAGAAAAACTGCTGAAAATGATGGACCTAAGGAGGCAGAAAATGAAGGTGTGAGTGTTACTGAGCAAATTGTTGAAAAAAGTTGCATAAAATCTGAACCAGAAGCTGGAACTGATGCTATAACCCCCGAAACTGATCTAAGCCTGAAGCTGCACTTTCGTGAAAAGAAGCTTATTGATTTCAGGGAGAAGTTGTATCTTGCACCCTTGACCACTGTTGGAAATCTCCCTTTCCGTAGAGTTTGCAAAGTATTAGGAGCTGATATAACTTGTGGTGAAATGGCAATGTGCACAAATCTCTTGCAGGGTCAAGCCTCGGAATGGGCATTGTTAAGACGTCATTCATCTGAAGATTTGTTTGGTGTACAAATCTGTGGGGCATATCCAGATACTGTGGCACGAACAGTTGAACTAATAGAGCAGGAATGTAAAATAGATTTTATTGATATAAATATGGGTTGCCCGATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTAACAAAACCAATGCGGATGAAAAGTATCGTAGAAGTAGCTTCAGGCACAGTGGATAAACCAATAACTCTCAAGGTACGGACAGCTTATTTTGAAGGGAAGAATCGCATTGATTCTCTGATTGCAGACATCGGCTCTTGGGGAGCCAGTGCCGTGACAATACATGGTAGGTCACGTCAACAACGCTATAGCAAGCTGGCTGACTGGGACTACGTATACCAGTGTACCAGGAAAGCCCCTACTACATTACAAGTAGTGGGGAATGGAGATGTTTTCTCATTTGTAGACTGGAACAAACACCGAACTGAATGCCCTGAACTTGCTACGTGCATGATTGCTCGTGGTGCACTGATTAAACCTTGGATATTTACGGAGATAAAGGAACAGAGACATTGGGACATCAGTTCTGGAGAGCGCCTAAATATTCTCAAAGATTTTGTGAATGTTGGCCTTGAACACTGGGGTTCTGACACAAAAGGGGTTGAGACAACGAGGCGGTTCTTGTTGGAATGGCTTAGTTACACTTGTAGGTATATACCTGTTGGTCTTTTGGATGTGGTTCCACAACGAATAAACTGGCGTCCACCATCTTACTGTGGGCGTGATGAGCTTGAGACACTAATGGCCTCAGACTCTGCAGCTGATTGGATACGAATATCAGAGATGTTACTTGGCAAGGTTCCAGATGGCTTTACATTTTCACCAAAGCATAAATCAAATGCTTATGATAGAGCTGAAAATGGTTGA 2028 0.4418 MDEEERDEGSSVVVEQTPEQLVARAIAPVKKDFLRPPPVRASSPNDDVSIPNDTKTSVLAKEKKSKRQLKRERRQEQKSARNLCPEIAKSGDVSSCPYKDKCRFSHDLEGFKAQKPADLEGQCPFLKSGGSCPYGLACRFSSTHEDGVPSANLKNSFEVNGLSKDVQKLLWKNKMNFSKADAKLKSLGLMGPSKSKRNDMENKDGGDTGSNKCDHSDDSGSCVVTSDSGSKLECPAEVMNDDDNDIDGNSESDVLCPQKRRKTAENDGPKEAENEGVSVTEQIVEKSCIKSEPEAGTDAITPETDLSLKLHFREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADITCGEMAMCTNLLQGQASEWALLRRHSSEDLFGVQICGAYPDTVARTVELIEQECKIDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSIVEVASGTVDKPITLKVRTAYFEGKNRIDSLIADIGSWGASAVTIHGRSRQQRYSKLADWDYVYQCTRKAPTTLQVVGNGDVFSFVDWNKHRTECPELATCMIARGALIKPWIFTEIKEQRHWDISSGERLNILKDFVNVGLEHWGSDTKGVETTRRFLLEWLSYTCRYIPVGLLDVVPQRINWRPPSYCGRDELETLMASDSAADWIRISEMLLGKVPDGFTFSPKHKSNAYDRAENG 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11293g00002 675 ProSitePatterns Uncharacterized protein family UPF0034 signature. 407 425 IPR018517 GO:0008033|GO:0017150|GO:0050660
Mupr11293g00002 675 MobiDBLite consensus disorder prediction 188 277 - -
Mupr11293g00002 675 MobiDBLite consensus disorder prediction 1 20 - -
Mupr11293g00002 675 SUPERFAMILY FMN-linked oxidoreductases 323 636 - -
Mupr11293g00002 675 Gene3D - 73 152 - -
Mupr11293g00002 675 ProSiteProfiles Zinc finger C3H1-type profile. 122 147 IPR000571 GO:0046872
Mupr11293g00002 675 MobiDBLite consensus disorder prediction 196 214 - -
Mupr11293g00002 675 Gene3D Aldolase class I 318 561 IPR013785 -
Mupr11293g00002 675 MobiDBLite consensus disorder prediction 28 94 - -
Mupr11293g00002 675 ProSiteProfiles Zinc finger C3H1-type profile. 78 109 IPR000571 GO:0046872
Mupr11293g00002 675 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 319 561 - -
Mupr11293g00002 675 MobiDBLite consensus disorder prediction 254 274 - -
Mupr11293g00002 675 FunFam tRNA-dihydrouridine(47) synthase [NAD(P)(+)] 74 154 - -
Mupr11293g00002 675 Pfam Dihydrouridine synthase (Dus) 326 561 IPR035587 -
Mupr11293g00002 675 Coils Coil 59 79 - -
Mupr11293g00002 675 PANTHER TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE 17 669 - -
Mupr11293g00002 675 CDD DUS_like_FMN 323 558 IPR035587 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mupr11293g00002 Dus 1.4e-49 CL0036
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11293g00002 K05544 - gmx:100783494 1235.32