Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11288g00001 ATGGAGTATGGAAGTGGGTCTCCTGGTGATCACCATCATCACCATGATGGTTCTTCTGATTCACAGAGAAGGAAGAAGCGTTACCACCGTCACACAGCTAACCAGATTCAGAGGCTTGAATCGATGTTCAAGGAGTGTCCACATCCAGACGAGAAGCAGAGGTTGCAGTTGAGTAGGGAGTTAAACTTGGCGCCTAGACAGATCAAATTTTGGTTCCAGAACAGGAGGACCCAGATGAAGGCACTCTTAATTTTTTTTATTACTGATAATTGTGCACTCCGAGCGGAGAATGACAAGATTCGTTGCGAGAACATAGCCATAAGGGAGGCCTTGAAAAATGTTATCTGCCCCTCTTGTGGTGGTCCTCCTCTCAATGATGATTGTTATTTTGATGAACAAAAGTTGAGATTGGAGAATGCCCAACTCAAAGAGGAGCTTGATAGGGTATCTAGCATTGCAGCTAAGTACATTGGAAGGCCAATTTCTCAACTTCCACCTGTTCAGCCTATTCATATATCTCCTCTGGACTTATCAATGGGGAGTATGTTGAGCCAAGGGTTGGGTGGCCCTTCCCTTGATCTTGATCTTCTCCCGGGGAGTTCTTCGTCGTCCATGCCGAATATGCCTCCTTACCAACCCGCTTGTCTTTCAGACATGGATAAGTCCCTCATGTCCGACATTGCCTCAAACGCCATGGCAGAAATGATCAGGCTATTGCAAACAAATGAGCCCTTGTGGATGAGAGGTGCTGATGGGAGGGATGTCCTTGATCTTGATACTTATGAAAGAATGTTCCCCAAGGGTAATAGTCACCTGAAGAACCCTAATGTTCACATCGAAGCTTCTAGAGATTCGGGAGTTGTAATTATGAATGGCTTAACTTTGGTTGATATGTTTATGGACCCGAACAAGTATATGGAGCTGTTTCCCACTATTGTCACAATGGCAAGAACAATTGAGGCTATATCTTCTGGAATGATGGGTGGTCATAGTGGTTCTTTGCAATTGATGTACGAAGAGTTGCAAGTTCTTTCTCCACTTGTTTCTACTAGAGAGTTCTACTTCCTGCGTTACTGTCAGCAAATTGAGCAAGGCTGGGCAATAGTAGATGTTTCATATGATTTTCCTCAAGATAACCAATTTGCTCCTCAATTTAGGTGCCACCGTCTTCCTTCTGGTGTCTTTATCCAAGACATGCCTAATGGATATTCCAAGGTTGCTTGGATTGAACATGTAGAAATTGAAGACAAAACTCCAGTTCATAGGCTCTACAGAAATATCATTTATAGTGGTATTGCATTTGGAGCACAAAGATGGCTGACTACACTTCAGAGGATGTGTGAAAGGATTGCTTGTCAAATGGTGACAGGCAATTCTACCCGCGATCTTGGAGGAGTGATTCCCTCTCCTGAGGGCAAGAGGAGCATGATGAAACTTGCACAAAGGATGGTGACCAATTTTTGCGCGAGCATAAGTGCATCAGCCGGCCACCGATGGACCACACTCTCTGGGATGAATGAGATTGGAGTGAGAGTAACTGTTCATAAAAGCACTGACCCTGGCCAACCTAATGGTGTGGTGCTGAGTGCAGCCACCACCATTTGGCTCCCCATACCTCCACAAACTGTGTTCGATTTCTTCAAGGATGAAAGGAAAAGACCTCAGTGGGATGTTCTTTCCAATGGCAATGCTGTGCAAGAGGTTGCTCATATAGCAAATGGTCCACACCATGGCAACTGCATATCCGTGCTTCGAGCTTTCAACACAAGTCAAAACAACATGCTGATCCTACAGGAGAGCTGTGTTGACTCGTCAGGTTCCCTAGTGGTGTACTGTCCAGTTGATCTGCCAGCTATCAACATAGCAATGAGTGGTGAAGATCCTTCATACATCCCCCTCCTTCCATCCGGCTTCACCATTTCCCCCGACGGCCAAGCTGACCAAGACGGCGGCGGGGCCTCAACAAGCACAAGCACAAGCAGGATCATGGGGGGTTCTGGTGGTTCACTCATCACTGTTGCATTCCAGATTCTAGTGAGTAGCCTGCCATCTGCCAAGCTGAACATGGAGTCGGTGACGACGGTTAATAGCCTCATCGGCAACACTGTCCAGCAAATAAAGGCTGCCTTGAATTGTCCTAGTTCCTGA 2148 0.4618 MEYGSGSPGDHHHHHDGSSDSQRRKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELNLAPRQIKFWFQNRRTQMKALLIFFITDNCALRAENDKIRCENIAIREALKNVICPSCGGPPLNDDCYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISPLDLSMGSMLSQGLGGPSLDLDLLPGSSSSSMPNMPPYQPACLSDMDKSLMSDIASNAMAEMIRLLQTNEPLWMRGADGRDVLDLDTYERMFPKGNSHLKNPNVHIEASRDSGVVIMNGLTLVDMFMDPNKYMELFPTIVTMARTIEAISSGMMGGHSGSLQLMYEELQVLSPLVSTREFYFLRYCQQIEQGWAIVDVSYDFPQDNQFAPQFRCHRLPSGVFIQDMPNGYSKVAWIEHVEIEDKTPVHRLYRNIIYSGIAFGAQRWLTTLQRMCERIACQMVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASISASAGHRWTTLSGMNEIGVRVTVHKSTDPGQPNGVVLSAATTIWLPIPPQTVFDFFKDERKRPQWDVLSNGNAVQEVAHIANGPHHGNCISVLRAFNTSQNNMLILQESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTISPDGQADQDGGGASTSTSTSRIMGGSGGSLITVAFQILVSSLPSAKLNMESVTTVNSLIGNTVQQIKAALNCPSS 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11288g00001 715 CDD homeodomain 24 80 IPR001356 GO:0003677
Mupr11288g00001 715 Pfam Homeodomain 25 80 IPR001356 GO:0003677
Mupr11288g00001 715 FunFam Homeobox-leucine zipper protein GLABRA 2 226 448 - -
Mupr11288g00001 715 Pfam START domain 227 449 IPR002913 GO:0008289
Mupr11288g00001 715 SMART START_1 226 449 IPR002913 GO:0008289
Mupr11288g00001 715 FunFam Homeobox-leucine zipper protein HDG1 11 100 - -
Mupr11288g00001 715 SUPERFAMILY Homeodomain-like 5 80 IPR009057 -
Mupr11288g00001 715 Coils Coil 132 152 - -
Mupr11288g00001 715 CDD START_ArGLABRA2_like 221 448 - -
Mupr11288g00001 715 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 22 711 IPR042160 -
Mupr11288g00001 715 ProSiteProfiles 'Homeobox' domain profile. 22 82 IPR001356 GO:0003677
Mupr11288g00001 715 Gene3D - 261 451 IPR023393 -
Mupr11288g00001 715 MobiDBLite consensus disorder prediction 1 31 - -
Mupr11288g00001 715 SMART HOX_1 23 86 IPR001356 GO:0003677
Mupr11288g00001 715 ProSitePatterns 'Homeobox' domain signature. 57 80 IPR017970 GO:0000981|GO:0006355
Mupr11288g00001 715 MobiDBLite consensus disorder prediction 642 661 - -
Mupr11288g00001 715 SUPERFAMILY Bet v1-like 470 707 - -
Mupr11288g00001 715 Gene3D - 4 81 - -
Mupr11288g00001 715 MobiDBLite consensus disorder prediction 1 23 - -
Mupr11288g00001 715 ProSiteProfiles START domain profile. 217 452 IPR002913 GO:0008289
Mupr11288g00001 715 SUPERFAMILY Bet v1-like 218 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11288g00001 Mupr-Chr11288 2751 6305 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11288g00001 20 715 Homeobox Transcription Factor Family AT1G73360 65.576 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mupr11288g00001 START 6e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11288g00001 K09338 - gmx:100809075 1243.41