Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr1127g00001 ATGGGGTGTTTCACTGTATTGAAGAGCAAAAAGAAAAAGTCTGATCCAATGGTCTACGTGAAACGTGTAAGCCATAATGAGCACATACCTACAGTACTGCCTGAGCCTCAAACTCATACTCCTTCCCTCCAGTCTGCTCCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAAAGTCGGTAACAATAGAGCAAGAACATTATCTGCTCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCTTCAATTGAGTATGAGGAACAAGAAGAGTCAAAACACCGAACTGGATCAATGAAGGAGCAGCGTACATCTAGTCCACAACCTTTACCACTTCCATCCCCTCAGGGAGGTGGTGTATTGAAGGCTGTGGGCAGCTTTAAGTCAGTGACAGCTAGTGGTCCTCTATATGCTTCTGGACCTTTGCCACTCCCACCTACTGGGTCACTTCGGAATTTTCTGTATGAGGAAATTGCTGCTGCTTGCCACAATTTCTCTTCTGATAGATGCATGTCAGAATGTCTTTCGTCCACTATATATAAGGCTTCCTTTGGTGATGATGTTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACACGGCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCCTTGCAACATCCAAACCTCTGTAAACTGCTAGGATTTCATGCACGAGATGGTTCAGAAAACAGAATGTTGGTTTATGAGAGGCTGTACCATGGCAGCTTGGATCGCTTATTGTATGGGAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCTTTATGTGCTGCACAAGGCCTAACTTTCTTGCACGAAGAAGGACCTTTTCAGGCAATGTATAATGAATTTTCAACAGCCAACATACAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCCGAAGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAAGGAATGCTCACTCCAAAGAGCAATGTATGGAGTTTTGGAATTTTTCTTCTGGAGCTACTTACAGGAAGAAAGAATCTTGATAGCCGCCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCCGGCCGTTCCTAGCCGACATCTACCGTCTGTCGTTGATCATGGATCCTCAACTCAAAGGCCGCTTTCCTTCTAAAGCAGCAAGAACCATAGCTGACATTGCACAAAGATGCCTTCAAAAGGAGCCATCAGAGAGACCTACCATGAGAACTGTTGTTGAGCATCTCAAGATGATACAGGATTTGAAATACTCGTGCCGGTTCCCGCTGCAAGAGCCAGCATCAAACCTTGGAAAACACATGTCAAGATCACCAAGTCTGAATGGTATCATCTGCCCTGCACCAAGGTTGAGTTTCTCACCATCACCGCCTTCGGGAGCCACCATATCTGTCTCACCACCAAGATGGTCTGGAGTGCCCATCCTCCTTCCTGCGCTTGCATGTTCTTCCAGCCTCTCTTTGGAGGAGCTTGACAGGCAGGAAAGCCGCAAGTCATCATCCTCAGCCTCGAGAAGGGCTAGTTTCCGAACAACAATGGTGGCGGGAACTGTAACCTTGAAGCTTAACCTCTCCGCTTTTTCTTCTTCAATGTCGAGTTTCACCGCTTCCTCTTCCTCCTCTTCGTTCCCCTCTCTTCTTCCAATGCGCACTCCTTTTTCTAAACCCCGATTTCTCAGGATTTACGCCTTGTCCAGCAACGACATCAAAGTCGGCACCAACCTCGAAGTCGACGGCGCTCCTTGGCGCGTCATAGAGTTTCTTCATGTTAAGCCCGGAAAAGGCGCGGCGTTTGTGAGGACCAAAATGAAGAATTATATCACGGGGAACACGGTTGAGAAAACATTTAGAGCTGGAAGCTCGATTGACCAAGCAGATATATCCAAGGAAACAAAGCAGTTCACATATAAAGATGGTTCTCAATTTGTCTTCATGGACTTGAATACATATGAGGAGTTTCGTCTGGGTGAATCAGAAATTGGAGACAGAATAAAGTGGCTAAAAGAGGGAATGGACTGCAATTTGCTGTTATGGAATGGAAAAGTTATTGATGTTGAACTCCCTATTACAGTCAAGCTTGCTGTAGTTGATGTGGATCCCGGAGTTAAGGGTGACACGGCTCAAGGTGGAACAAAGCCAGCCACTCTTGACACTGGCGCTGTTGTCAATGTACCACTCTTTGTAAATGTCGGCGATGAAATATTGGTTGATTCAAGAACTGGGCAGTACATGAGCCGTGCTTAA 2346 0.4523 MGCFTVLKSKKKKSDPMVYVKRVSHNEHIPTVLPEPQTHTPSLQSAPPSFRTRVKPIQPINKVGNNRARTLSAPSTLDAAEQDALASIEYEEQEESKHRTGSMKEQRTSSPQPLPLPSPQGGGVLKAVGSFKSVTASGPLYASGPLPLPPTGSLRNFLYEEIAAACHNFSSDRCMSECLSSTIYKASFGDDVSSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHARDGSENRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLADIYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSERPTMRTVVEHLKMIQDLKYSCRFPLQEPASNLGKHMSRSPSLNGIICPAPRLSFSPSPPSGATISVSPPRWSGVPILLPALACSSSLSLEELDRQESRKSSSSASRRASFRTTMVAGTVTLKLNLSAFSSSMSSFTASSSSSSFPSLLPMRTPFSKPRFLRIYALSSNDIKVGTNLEVDGAPWRVIEFLHVKPGKGAAFVRTKMKNYITGNTVEKTFRAGSSIDQADISKETKQFTYKDGSQFVFMDLNTYEEFRLGESEIGDRIKWLKEGMDCNLLLWNGKVIDVELPITVKLAVVDVDPGVKGDTAQGGTKPATLDTGAVVNVPLFVNVGDEILVDSRTGQYMSRA 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr1127g00001 781 Pfam Elongation factor P, C-terminal 725 780 IPR015365 GO:0005737|GO:0043043
Mupr1127g00001 781 Gene3D Phosphorylase Kinase; domain 1 150 250 - -
Mupr1127g00001 781 Gene3D - 661 722 IPR012340 -
Mupr1127g00001 781 FunFam Organellar elongation factor P 591 659 - -
Mupr1127g00001 781 SMART Elong_fact_P_C_2 725 780 IPR015365 GO:0005737|GO:0043043
Mupr1127g00001 781 FunFam Elongation factor P 724 781 - -
Mupr1127g00001 781 ProSitePatterns Elongation factor P signature. 746 765 IPR013852 -
Mupr1127g00001 781 ProSiteProfiles Protein kinase domain profile. 169 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr1127g00001 781 Gene3D - 591 659 IPR014722 -
Mupr1127g00001 781 Hamap Elongation factor P [efp]. 597 781 IPR011768 GO:0003746|GO:0005737|GO:0006414
Mupr1127g00001 781 Pfam Elongation factor P (EF-P) KOW-like domain 600 655 IPR013185 -
Mupr1127g00001 781 Pfam Elongation factor P (EF-P) OB domain 667 717 IPR001059 GO:0003746|GO:0006414
Mupr1127g00001 781 MobiDBLite consensus disorder prediction 29 78 - -
Mupr1127g00001 781 SUPERFAMILY Nucleic acid-binding proteins 724 781 IPR012340 -
Mupr1127g00001 781 SUPERFAMILY Nucleic acid-binding proteins 661 725 IPR012340 -
Mupr1127g00001 781 CDD S1_EF-P_repeat_1 667 722 IPR001059 GO:0003746|GO:0006414
Mupr1127g00001 781 MobiDBLite consensus disorder prediction 31 51 - -
Mupr1127g00001 781 Gene3D - 724 781 IPR012340 -
Mupr1127g00001 781 SUPERFAMILY Protein kinase-like (PK-like) 148 453 IPR011009 -
Mupr1127g00001 781 MobiDBLite consensus disorder prediction 90 104 - -
Mupr1127g00001 781 Gene3D Transferase(Phosphotransferase) domain 1 252 456 - -
Mupr1127g00001 781 SUPERFAMILY Translation proteins SH3-like domain 594 657 IPR008991 -
Mupr1127g00001 781 MobiDBLite consensus disorder prediction 63 77 - -
Mupr1127g00001 781 MobiDBLite consensus disorder prediction 90 122 - -
Mupr1127g00001 781 CDD S1_EF-P_repeat_2 725 780 IPR015365 GO:0005737|GO:0043043
Mupr1127g00001 781 NCBIfam elongation factor P 599 781 IPR011768 GO:0003746|GO:0005737|GO:0006414
Mupr1127g00001 781 PANTHER ELONGATION FACTOR P 533 781 IPR020599 -
Mupr1127g00001 781 SMART EFP_2 663 717 IPR001059 GO:0003746|GO:0006414
Mupr1127g00001 781 Pfam Protein tyrosine and serine/threonine kinase 183 444 IPR001245 GO:0004672|GO:0006468
Mupr1127g00001 781 FunFam Elongation factor P 660 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr1127g00001 Mupr-Chr1127 4595 16170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr1127g00001 148 448 Receptor kinase-like Gene Family AT4G02010 37.908 9.34e-55 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Mupr1127g00001 PK_Tyr_Ser-Thr 2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr1127g00001 - - gmx:100808712 957.977