Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11255g00001 ATGACGCAGCAGAATGTGGTAGTGTCTGACACAGCAACAAGAGTGGAAAAGAAGCCACCGGCGGCACCGGGAGGGTACATTTCCATTTCAAGGAGGAGGGTTTTGAAGAACCTTGAAATCAACGGTGGCCAAAGAATCAATGCATGGGTTGAGTCCATGAGAGCCTCCTCTCCAACCCATCTTAAATCCACACCTTCTTTCTCTCAGGAGCATAACTCTTGGATTCTTCGCCATCCGTCGGCATTAGACATGTTTGACCAAATCATTGACGCGTCAAAGGGAAAACAAATTGTCATGTTCCTCGACTATGATGGCACACTGTCCCCTATAGTGGACGACCCTGACCGTGCTTTCATGTCTGATTCGGTTAGTTTCGTAGCTCGCAACATGAGAAAAACAGTGAGGAAACTCGCGAGGTGTTTCCCTACAGCTATAGTGACTGGCCGATGCAAAGACAAGGTATACAATTTTGTTCGCTTGGCAGAGCTATATTATGCGGGAAGCCATGGCATGGATATTAAAGGGCCAACAAGAAGCTCCAAATACAACAAAGATAGCAAAGCCGAGGCTATTCTTTTTCAAGCTGCCAATGATTTTCTTCCCATGATAGACGAGGTGTACCAACAGTTAGTTGATAAGACAAAATCAACTCCTGGAGCTATGGTTGAGAATAACAAATTCTGCCTCTCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGAGTGAACTGGCACGCCAAGTGAAGTCAGTTTTAAAGGACTACCCAAAGCTCCGACTTACCCAAGGAAGAAAGGTGCTAGAGATTCGTCCCACTATTAAATGGGACAAAGGCAAAGCCCTGGAATTTTTATTAGAGTCGCTTGGTGAGTTTTACTCTAACACACTACGTTTGTCCAATTGTAGTGATGTCTTTCCTGTTTATATTGGCGATGATCGATCCGATGAAGATGCCTTCAAGAAATTAAGAGACAGAGGACAAGGTCTTGGCATTCTTGTCTCCAAATTTCCAAAAGACACAAGTGATGAACTTTCTTCAACGCTTGGTAGAGTGGAAACATGTGTCCCTGAGAGCACGTTCCCGGGTGTAAATGAGTAG 1098 0.4444 MTQQNVVVSDTATRVEKKPPAAPGGYISISRRRVLKNLEINGGQRINAWVESMRASSPTHLKSTPSFSQEHNSWILRHPSALDMFDQIIDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSVSFVARNMRKTVRKLARCFPTAIVTGRCKDKVYNFVRLAELYYAGSHGMDIKGPTRSSKYNKDSKAEAILFQAANDFLPMIDEVYQQLVDKTKSTPGAMVENNKFCLSVHFRCVDEKKWSELARQVKSVLKDYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGEFYSNTLRLSNCSDVFPVYIGDDRSDEDAFKKLRDRGQGLGILVSKFPKDTSDELSSTLGRVETCVPESTFPGVNE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11255g00001 365 FunFam Trehalose 6-phosphate phosphatase 196 272 - -
Mupr11255g00001 365 SUPERFAMILY HAD-like 98 343 IPR036412 -
Mupr11255g00001 365 FunFam Trehalose 6-phosphate phosphatase 202 349 - -
Mupr11255g00001 365 Gene3D - 186 272 - -
Mupr11255g00001 365 CDD HAD_TPP 98 341 - -
Mupr11255g00001 365 Pfam Trehalose-phosphatase 100 342 IPR003337 GO:0003824|GO:0005992
Mupr11255g00001 365 NCBIfam HAD-IIB family hydrolase 99 325 IPR006379 -
Mupr11255g00001 365 Gene3D - 99 335 IPR023214 -
Mupr11255g00001 365 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 23 343 IPR044651 GO:0004805|GO:0005992
Mupr11255g00001 365 MobiDBLite consensus disorder prediction 1 23 - -
Mupr11255g00001 365 NCBIfam trehalose-phosphatase 95 331 IPR003337 GO:0003824|GO:0005992
Mupr11255g00001 365 FunFam Trehalose 6-phosphate phosphatase 97 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11255g00001 Mupr-Chr11255 4610 6992 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11255g00001 86 322 Trehalose Biosynthesis Gene Families AT1G23870 26.829 1.28e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11255g00001 K01087 - gmx:100794430 603.208