Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11241g00002 ATGGCTACTCTTGCTCTCCGAAACTTCTCTTCCACTTCCCGGCGCTTCTTCCCTTTAACCTCTCAAATCCACTCTTCCTTCTCTCATTCCCCTCTCTCTCCTCCCAATGACTCCACCTCCTCTTCTTTCAATTCCAATCCCTGGTGGAGATCCATGGCCACCTTCACCAGAACGAAACCTCACGTTAATGTCGGAACTATTGGACACGTGGATCACGGGAAGACCACGCTTACCGCGGCAATCACCAAGGTACTTGCGGATGAAGGGAAAGCTAAGGCTGTGGCCTTCGATGAAATCGACAAGGCTCCTGAAGAGAAGAAGAGAGGAATCACGATTGCAACGGCACATGTTGAGTATGAGACTGTGAAACGACATTATGCGCATGTAGACTGCCCTGGACATGCTGATTATGTTAAAAATATGATTACAGGAGCTGCACAGATGGATGGTGGTATACTTGTTGTATCTGCACCTGATGGACCGATGCCTCAAACCAAGGAGCACATTCTTCTTGCTCGCCAAGTTGGTGTGCCATCTCTTGTGTGCTTTCTAAATAAAGTCGATGCTGTTGATGATCCAGAGTTGTTAGAGCTTGTAGAAATGGAGCTTCGTGAGCTTCTGAGCTTCTACAAGTTTCCCGGGGATGAAATCCCTATCATTAGAGGTTCAGCATTGTCCGCTTTACAGGGTACAAATGATGAGATTGGAAGAAAAGCCATTCTAAAATTAATGGATGCTGTAGATGAATACATTCCTGATCCTGTACGCCAACTTGACAAGCCTTTCCTAATGCCCATTGAAGATGTATTCTCAATTCAGGGACGCGGAACAGTGGCCACTGGCCGTGTCGAACAAGGGATCATTAAAGTTGGTGATGAAGTGGAGGTGTTGGGTCTAATGCAGGGTGGCCCTCTGAAAACAACAGTAACTGGAGTTGAGATGTTCAAGAAGATTTTGGATCAAGGACAAGCTGGTGATAATGTTGGTCTTCTTCTCCGTGGTCTGAAGCGTGAAGATATTCAACGTGGCCAGGTGATTGCCAAGCCTGGTTCTGTAAAAACATACAAGAAATTTGAGGCAGAGATATATGTACTCACAAAGGACGAGGGTGGGCGACACACTGCTTTCTTCTCTAACTATAGACCTCAGTTTTACTTGAGGACTGCTGATATCACTGGAAAAGTAGAGTTGCCTGAAAATGTTAAAATGGTTATGCCTGGAGACAACGTTACTGCCGTGTTTGATTTGATTTCCCCAGTTCCACTTGAAGCAGGACAAAGATTTGCCTTGAGAGAAGGTGGCAGAACAGTTGGTGCAGGTGTGGTGTCAAAAATATAA 1338 0.4574 MATLALRNFSSTSRRFFPLTSQIHSSFSHSPLSPPNDSTSSSFNSNPWWRSMATFTRTKPHVNVGTIGHVDHGKTTLTAAITKVLADEGKAKAVAFDEIDKAPEEKKRGITIATAHVEYETVKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAPDGPMPQTKEHILLARQVGVPSLVCFLNKVDAVDDPELLELVEMELRELLSFYKFPGDEIPIIRGSALSALQGTNDEIGRKAILKLMDAVDEYIPDPVRQLDKPFLMPIEDVFSIQGRGTVATGRVEQGIIKVGDEVEVLGLMQGGPLKTTVTGVEMFKKILDQGQAGDNVGLLLRGLKREDIQRGQVIAKPGSVKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKVELPENVKMVMPGDNVTAVFDLISPVPLEAGQRFALREGGRTVGAGVVSKI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11241g00002 445 CDD EF_Tu 60 254 IPR041709 -
Mupr11241g00002 445 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 100 115 IPR031157 -
Mupr11241g00002 445 CDD EFTU_II 262 350 IPR033720 -
Mupr11241g00002 445 Pfam Elongation factor Tu domain 2 276 346 IPR004161 GO:0005525
Mupr11241g00002 445 CDD EFTU_III 353 442 - -
Mupr11241g00002 445 Gene3D Translation factors 391 445 - -
Mupr11241g00002 445 Gene3D Translation factors 257 387 - -
Mupr11241g00002 445 PRINTS GTP-binding elongation factor signature 143 154 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 PRINTS GTP-binding elongation factor signature 107 115 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 PRINTS GTP-binding elongation factor signature 180 189 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 PRINTS GTP-binding elongation factor signature 127 137 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 PRINTS GTP-binding elongation factor signature 63 76 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 FunFam Elongation factor Tu 257 387 - -
Mupr11241g00002 445 Gene3D - 51 254 IPR027417 -
Mupr11241g00002 445 FunFam Elongation factor Tu 50 254 - -
Mupr11241g00002 445 NCBIfam small GTP-binding protein domain 62 198 IPR005225 GO:0005525
Mupr11241g00002 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 277 IPR027417 -
Mupr11241g00002 445 Pfam Elongation factor Tu GTP binding domain 59 252 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 PANTHER ELONGATION FACTOR TU-RELATED 55 445 - -
Mupr11241g00002 445 NCBIfam elongation factor Tu 51 445 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mupr11241g00002 445 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 59 255 IPR000795 GO:0003924|GO:0005525
Mupr11241g00002 445 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 356 445 IPR009001 -
Mupr11241g00002 445 SUPERFAMILY Translation proteins 256 352 IPR009000 -
Mupr11241g00002 445 Hamap Elongation factor Tu [tuf]. 50 445 IPR004541 GO:0003746|GO:0005525|GO:0006414
Mupr11241g00002 445 Pfam Elongation factor Tu C-terminal domain 351 445 IPR004160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11241g00002 Mupr-Chr11241 4996 9167 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11241g00002 57 445 Eukaryotic Initiation Factors Gene Family AT5G60390 30.275 5.91e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11241g00002 K02358 - gmx:100791600 809.29