Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11239g00001 ATGGCAAAGGCCCTTCCTTTACGCTCTCTCTCTCCTCACTGTGCGTTTCAAACCCAAAAATCCTCACTCGGGTCTCAATCCGAAAGCGATAGGCCACAAAAGAGGGCCTTTACTTCCTTACACACTCACTTCTGCCTCCTTCCTTCAATATTTCTTATTCTGCTTTCTTCTTCTTCTTCTTCTTCATCTTCTAGTGTTCTTCCATGGCGATCTCGAACACCGTGCCACCCACCTTCTTGTCTCTGCGCGGTTCCAATTCGGTTCCTCTTGTGGTTCGAGGGAGGAAAAGGGGGAAAGCTTGATATGAAGCTTTCAACATCAGGGTTGGGTCAGCAGGGACATGAAGGAGGGGAGAAGAAGTGTTTGAATTCTGAGCTATGGCATGCATGTGCGGGTCCCTTGGTGTCCCTACCAACTGCAGGGACTCGTGTGGTTTATTTCCCTCAGGGTCATAGCGAGCAGGTTGCTGCCACAACTAACAGAGAAGTTGATGGTCATATACCCAATTACCCGAGTTTGCCACCCCAGTTGATTTGCCAACTTCACAATGTTACAATGCATGCAGATGTTGAAACAGATGAAGTGTATGCTCAAATGACTCTACAGCCGTTGACTCCGCAAGAGCAGAAGGATACGTTTCTTCCCATGGAGTTGGGGATTCCAAGTAAGCAGCCCTCGAATTATTTTTGCAAGACATTGACGGCAAGTGACACCAGCACACATGGAGGGTTCTCTGTTCCTCGTCGTGCTGCTGAGAAAGTTTTCCCGCCATTGGTAGTGTTCATATTTTTCCTGATATATTTCCCTTATATTTCGGCTGTACAGGATTTCTCACAGCAACCGCCTGCACAAGAACTAATTGCTAGGGATCTCCATGACGTTGAGTGGAAGTTTCGACATATTTTTCGGGGTAAGGACAGCCAAAACGACACCTTCTTACAACAGGCTGGAGTGAATGAAAAGAATCAGCTTCTTTTGGGAATACGTCGAGCCAATCGGCCACAAACTGTCATGCCATCCTCAGTTCTATCTAGTGATAGTATGCACATTGGGCTTCTTGCAGCTGCTGCTCATGCTGCAGCAACTAATAGCTGCTTTACAGTGTTCTATAATCCAAGGGCTAGTCCATCTGAGTTTGTCATACCGCTTTCGAAATATATCAAAGCTGTGTACCATACACGTGTTTCTGTTGGTATGCGTTTCAGGATGCTTTTTGAGACTGAAGAATCAAGTGTCCGCAGGTACATGGGTACAATAACTGGCATAAGTGACTTGGATCCTGTTCGTTGGCCAAATTCTCATTGGCGGTCTGTTAAGGTTGGTTGGGATGAGTCAACAGCAGGAGAGAGGCAGCCCCGGGTCTCATTATGGGAAATTGAGCCTTTAACAACATTTCCAATGTATCCATCATTATTTCCCCTCAGATTGAAACGTCCATGGCATCCTGGCACCTCTTCTCTTCATGATGGCAGAGATGAAGCCACTAATGGGCTAATGTGGCTGAGGGGTGGACATGGAGACCAAGCTCTCAATTCCCTGAATTTTCAAGGTTCTGGTTTGTTGCCATGGATGCAGCAGAGAATGGATCCAACTTTGCTTGGAAATGATCATAATCAGCAGTACCAAGCCATGTTTGCAGGTGGTTTGCAGAACTTAGGCAGTGGAGATCTAGTGAGACAACAAATGATGAATTTTCAACAGCCTTTCAATTATCTTCAACAATCAGGAAACCCCAATCCTCCTTTGCAGCTTCAGCAACCGCAAGCAATTCAGCAATCCATATCTTCTAATAATATCCTACAGCCACAAGCCCAAGTATTGGCAGAGAACATGTCTCAGCACCTGCTTCAGAAATCACACAACAATCGAGAAGACCAAACACAGCAGCAGCATACTTATCAAGATACGGTTTTAATTCAAAGTGATCAGCTCCATCAGAGGCAACACTCTGGTTTACCTTCACCATCATATTCAAAACCGGATTTCTTAGAATCAAGCATGAAGTTCTCTGCTTCAGTTTCGCCTGGACAAAGCATGCTTAGTTCACTTTGTCCTGAAGGGAGTGGCAATCTCTTGAATTTATCCAGAAGTGGTCAGTCCATGCTGACTGAACAGTTACCCCAACAATCATGGGCCCCAAAGTTTACACCATTGCAGGTCAATGCCTTCGGCAACTCAATGTCACACATGCAATATTCTGGAAAAGATACTGCGATGGTGCCACCACATTGTAACTCAGACACCCAAAATCCTATTCTATTTGGCGTCAACATCGATTCATCTGGCCTTCTGCTCCCTACCACTGTCCCTCGTTATACAACTGCATCAGCTGATACTGATGCATCAGGAATGCCATTAGGGGAGTCTGGTGGATTTCAGGGTCCTCTATATCCTTGTGTGCAAGATTCATCAGAGTTGTTGCCAAGTGCAGGGCAAGTTGACCCCCAAAACCAGACACGAACATTTGTCAAGGTTTACAAATCAGGGTCAGTAGGGCGGTCACTGGACATCTCCCGGTTTAGCAGTTATCACGAGCTGAGGGAGGAGTTGGCACAGATGTTTGGTATTGAGGGGAAATTAGAAGACCCTCTTAGATCAGGCTGGCAGCTTGTATTCGTCGACAGGGAGAATGATGTTCTTCTCCTTGGCGACGACCCGTGGGAATCATTTGTCAATAACGTTTGGTATATCAAAATACTTTCACCTGAAGATATCCAGAAAATGGGAGAACAAGCCGTAGAATCTCTCGGTCCAAGTTCAGGACAGAGGCTGAATGGCACTGCTGCAGATTCTCATGAAATTGTTTCTGGACTTCCATCATTAGGCTCCCTTGAATACTGA 2841 0.4586 MAKALPLRSLSPHCAFQTQKSSLGSQSESDRPQKRAFTSLHTHFCLLPSIFLILLSSSSSSSSSSVLPWRSRTPCHPPSCLCAVPIRFLLWFEGGKGGKLDMKLSTSGLGQQGHEGGEKKCLNSELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQPLTPQEQKDTFLPMELGIPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLVVFIFFLIYFPYISAVQDFSQQPPAQELIARDLHDVEWKFRHIFRGKDSQNDTFLQQAGVNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGTSSLHDGRDEATNGLMWLRGGHGDQALNSLNFQGSGLLPWMQQRMDPTLLGNDHNQQYQAMFAGGLQNLGSGDLVRQQMMNFQQPFNYLQQSGNPNPPLQLQQPQAIQQSISSNNILQPQAQVLAENMSQHLLQKSHNNREDQTQQQHTYQDTVLIQSDQLHQRQHSGLPSPSYSKPDFLESSMKFSASVSPGQSMLSSLCPEGSGNLLNLSRSGQSMLTEQLPQQSWAPKFTPLQVNAFGNSMSHMQYSGKDTAMVPPHCNSDTQNPILFGVNIDSSGLLLPTTVPRYTTASADTDASGMPLGESGGFQGPLYPCVQDSSELLPSAGQVDPQNQTRTFVKVYKSGSVGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKMGEQAVESLGPSSGQRLNGTAADSHEIVSGLPSLGSLEY 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11239g00001 946 MobiDBLite consensus disorder prediction 570 590 - -
Mupr11239g00001 946 CDD B3_DNA 228 308 IPR003340 GO:0003677
Mupr11239g00001 946 SUPERFAMILY DNA-binding pseudobarrel domain 213 359 IPR015300 -
Mupr11239g00001 946 FunFam Auxin response factor 394 466 - -
Mupr11239g00001 946 SUPERFAMILY CAD & PB1 domains 817 894 - -
Mupr11239g00001 946 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 118 909 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr11239g00001 946 Gene3D - 227 324 IPR015300 -
Mupr11239g00001 946 Gene3D - 816 909 - -
Mupr11239g00001 946 Gene3D - 394 466 - -
Mupr11239g00001 946 Pfam Auxin response factor 356 439 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr11239g00001 946 FunFam Auxin response factor 815 909 - -
Mupr11239g00001 946 Pfam AUX/IAA family 817 904 IPR033389 -
Mupr11239g00001 946 ProSiteProfiles PB1 domain profile. 820 904 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11239g00001 Mupr-Chr11239 26859 39184 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11239g00001 199 917 B3 DNA Binding Superfamily AT5G37020 63.003 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11239g00001 - - gmx:100780393 1498.8