Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11235g00006 ATGGCTCACAATCACATCTCCACCGATTCACCTCTCTCTCGTCGCATCGTTCGTTCCTTCCTCCACTTTCTCAACTCTGTTGAACCGGGTCCCGCTGTTGATTCCGAGGGGATTGAAGTTGCTAGGGAGTGTTTGGCAGAGGCTTTTAAGCTTAATTCGTCTCCTGTGGTTGGTGATCATGTGAAATCTGATTCATTGATTGACATATTCAAGTCTCTTGAGGCTAATAAGCAATGTGAAACTAGTAATGCTGCGGCTGCTTCCAGTTCATTCTCGGGTGAGAATCCTGCTCGTGGGAAGAATCATTCTGAGGCGTTGAAGTCTACGGATGAAGATTCAATACAGGGTCCTCATGCTTTTGTCTCTAAAGATGAACTTTGTGGACAATTCTTTGCTGCTCTGGAGAAAAATCGCTATTTTGGGACCAATGCTGATGGGAGTGATGAAAAAGCAAGTAGTTTATTCAATGATGCTTTTATGAGCAACTTGAGGGAGCAGGTTGAAACTCCAGAAAGTAGGTGTAGTGTCAATGGTATTGAACCTTCCCTACTTTCAAATTGTGGTTCTAATGATGATGCTGTACCACTTTATGAAATTTATTGTAGGATGGAGGTGGTGGAACTTGAGATGGAAAGATCTGGTTGTCACCAGTTTAATTTGAAGAATTTGGCTGAATCACTAAAATCACTTGGTAACAAGGCAATGCAATCTAAGCAATACTCTGATGCAATTGAGTTGTATAATTGTGCCATTGCACTCCATGAAAAGAGTGCTGTTTACTACTGCAACAGGGCAGCTGCTTACACTCAGGTCAACAAATACACAGAAGCGATCCAAGATTGTCTTAGATCCATTGAGATTGATCCAAACTACAGCAAGGCATACAGTCGTCTGGGTTTGGCTTATTATGCGCAAGGAAATTACAGAGATGCCATTGATAAAGGGTTTAGAAAAGCCTTGCAGTTGGATCCAAATAATGAGACTGTCAAAGAAAATATACGAGTAGCCGAGGGTAAATTGTTAGAAGAGCAACACCGTGCATATCACAACCAGAATCCAAGATCATCTCAAGAATTCCCAAACCAATCTACACAAGGACCAAGAAGTCACGCAGTGCCACCTCCATTTTCCTCTATGCCATTTAACCCGAACGATCTTGCAAGCATGTTTATGAACATAGCCGCGAATGCTACGAATGCACATCAGGGGTCGCATTCTCAGGAAAGGCAAGAAGATACCAATGCAGGTGGAGCTAGTGAACCTGAAATAAGAATGGGGGGAAACATTAATGTAAACTTTGACCAAATGCCTGAGGATCTAACAGGGGCCTTTCAATCTATGATGGAAATGTTATCAGGGGCCGTGCCTCCCGGCCAACCGCAAGATCAAATGAATGGAAGAACACCACCAAACTAA 1416 0.4294 MAHNHISTDSPLSRRIVRSFLHFLNSVEPGPAVDSEGIEVARECLAEAFKLNSSPVVGDHVKSDSLIDIFKSLEANKQCETSNAAAASSSFSGENPARGKNHSEALKSTDEDSIQGPHAFVSKDELCGQFFAALEKNRYFGTNADGSDEKASSLFNDAFMSNLREQVETPESRCSVNGIEPSLLSNCGSNDDAVPLYEIYCRMEVVELEMERSGCHQFNLKNLAESLKSLGNKAMQSKQYSDAIELYNCAIALHEKSAVYYCNRAAAYTQVNKYTEAIQDCLRSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFRKALQLDPNNETVKENIRVAEGKLLEEQHRAYHNQNPRSSQEFPNQSTQGPRSHAVPPPFSSMPFNPNDLASMFMNIAANATNAHQGSHSQERQEDTNAGGASEPEIRMGGNINVNFDQMPEDLTGAFQSMMEMLSGAVPPGQPQDQMNGRTPPN 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11235g00006 471 Pfam Tetratricopeptide repeat 293 326 IPR013105 -
Mupr11235g00006 471 ProSiteProfiles TPR repeat profile. 258 291 IPR019734 GO:0005515
Mupr11235g00006 471 MobiDBLite consensus disorder prediction 399 422 - -
Mupr11235g00006 471 ProSiteProfiles TPR repeat profile. 292 326 IPR019734 GO:0005515
Mupr11235g00006 471 SMART tpr_5 258 291 IPR019734 GO:0005515
Mupr11235g00006 471 SMART tpr_5 224 257 IPR019734 GO:0005515
Mupr11235g00006 471 SMART tpr_5 292 326 IPR019734 GO:0005515
Mupr11235g00006 471 FunFam Small glutamine-rich tetratricopeptide repeat-containing protein alpha 2 76 - -
Mupr11235g00006 471 Pfam Tetratricopeptide repeat 258 291 IPR001440 GO:0005515
Mupr11235g00006 471 Gene3D Immunoglobulin FC, subunit C 1 76 - -
Mupr11235g00006 471 MobiDBLite consensus disorder prediction 452 471 - -
Mupr11235g00006 471 MobiDBLite consensus disorder prediction 349 383 - -
Mupr11235g00006 471 MobiDBLite consensus disorder prediction 84 114 - -
Mupr11235g00006 471 MobiDBLite consensus disorder prediction 399 414 - -
Mupr11235g00006 471 SUPERFAMILY TPR-like 223 336 IPR011990 GO:0005515
Mupr11235g00006 471 ProSiteProfiles TPR repeat profile. 224 257 IPR019734 GO:0005515
Mupr11235g00006 471 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 219 366 - -
Mupr11235g00006 471 Gene3D Tetratricopeptide repeat domain 219 378 IPR011990 GO:0005515
Mupr11235g00006 471 MobiDBLite consensus disorder prediction 350 371 - -
Mupr11235g00006 471 PANTHER LD24721P 1 455 IPR047150 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11235g00006 223 322 U-box Gene Family AT3G07370 32.000 2.77e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11235g00006 K16365 - gmx:100799770 669.463