Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11230g00001 ATGACACAATACACACACCCTCGTCATCATGCAAAAGCCCTAGCTAGTTTTGATTTACCTTGCACCCCATGGATGGCGTCTTCGCACTCCCTGAAGCTGCCAGAGCAGATTTTCTCCGCTATCTCGTCCACTCTTTGGGCTGCACCTACTCGTTTGTTCTTCTTGGATGGGTTCTACGATGCAACGAACAACCAACCAAGCTCTTCTTCAGGGAGTGTAGCCCAAAGGCTTTTTCACCAATATCGGGCTTTAACGTTTCATGTCAATGATGACTGTGTTCCTGGAGTCGCTTCCGGGAACCACGTTCCCTACGTAGAACTGCAACAGTTGGATCTTCTAAGACTGACATCAACTCAAATACAAACACAGTTCTATCAGGAGGCAAGGATTGAGGTTGCTGTTTTCATGGGGTGCAAAAAAGGAGAAATTGAGCTTGGGTTCTCGAAAATGTTTCAAGGTGACATTCAGACAGCACTTAAGAATTTATTTGGAGAAGATTTGTATATACATTATTCCAAATCAACAAGTGATGAGATTCCACCTTCATCATTATCTACGGGTAGGTCTGATCAATCTTCATCCCTCTTACTCACTATTCCGGGCACTTCCCAGTCCCAAACTAGCCTCCAAGCATTTGCTCAAGTCATTCCAAGTTATTTCCCCACACCAGAGGGTGAACACGAAGCAATAGTGAAAGCGTTTCTCCAAGTTATATCTTCACCTTCTCAGCAGCATCAACCCCACCATGTTTTACCTACTTATACTTCACCAATACATCCAAGAGAGGGAGATACAGCTTTGGAGAGAAATAGACCAGATATAATAAGCACACCAAATATAGCCTCCAATTTTGTCAGCCAAAGCCTGCGGAATATTGCTCAACCAGCCCCTCCCATTAATACGCAGCAGCATCATATGATATCAGAGCGAAGAAGGCGTCAAAAACTCAATGAGAATTTTGAGGCACTAAGAACACTTCTTCCTCCTGGAACTAAGAAAAACAAAGGGTCGATCCTAATAACAGCAAAAGAGAGAGTGAGATCTTTGATGGATGAAATTGAAAGGCTTAACACAAGAAATCAGCAGCTGGTGACAGTATTGCCAGGGAAAGAAGCTACTGCTACTGCTAGTACTGAAGAAAAATCAGCTAGCTCCTCAAATGCGAGATTGAATGTTCGGGTTTTGCATGTGTTGGAATCGACTTCATCCGTGGACTTGCAAGTGAGTGTGAGAGGAGAAAATTCTCGAGTTGATGTATTGATTCGCTTATTGGAATTCCTAGAACGGGTTCAGAACATAAACTTGATTTCCATGGCCGCAAACAACCATATTACAGGAGGGATACATATTAATCAATTAACTTTCAGGCTGAGGATTATTGAGGTATGTACCCAAAACAACTCATCAAGTAGCACGTAA 1419 0.4292 MTQYTHPRHHAKALASFDLPCTPWMASSHSLKLPEQIFSAISSTLWAAPTRLFFLDGFYDATNNQPSSSSGSVAQRLFHQYRALTFHVNDDCVPGVASGNHVPYVELQQLDLLRLTSTQIQTQFYQEARIEVAVFMGCKKGEIELGFSKMFQGDIQTALKNLFGEDLYIHYSKSTSDEIPPSSLSTGRSDQSSSLLLTIPGTSQSQTSLQAFAQVIPSYFPTPEGEHEAIVKAFLQVISSPSQQHQPHHVLPTYTSPIHPREGDTALERNRPDIISTPNIASNFVSQSLRNIAQPAPPINTQQHHMISERRRRQKLNENFEALRTLLPPGTKKNKGSILITAKERVRSLMDEIERLNTRNQQLVTVLPGKEATATASTEEKSASSSNARLNVRVLHVLESTSSVDLQVSVRGENSRVDVLIRLLEFLERVQNINLISMAANNHITGGIHINQLTFRLRIIEVCTQNNSSSST 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11230g00001 472 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 302 365 IPR036638 GO:0046983
Mupr11230g00001 472 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 117 460 IPR044658 -
Mupr11230g00001 472 Pfam Helix-loop-helix DNA-binding domain 303 349 IPR011598 GO:0046983
Mupr11230g00001 472 Coils Coil 339 366 - -
Mupr11230g00001 472 SMART finulus 306 355 IPR011598 GO:0046983
Mupr11230g00001 472 CDD bHLH_AtbHLH_like 305 356 IPR045239 -
Mupr11230g00001 472 Gene3D - 300 371 IPR036638 GO:0046983
Mupr11230g00001 472 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 300 349 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11230g00001 Mupr-Chr11230 3410 5770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11230g00001 36 440 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 33.684 4.37e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr11230g00001 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11230g00001 - - gmx:102670282 489.574