Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11227g00004 ATGGAAGGAATTACGTTTCTATTACGGATTTACAAAGGGAAGACTACTGGTCTATGCATGCAACTTGAAGGTGAAGACCCACATTTGGTGGAAGCTTCAGAAACACTCTCCTTCGCGTTTTTCTTCGTTATCTTTAAGGAAAAGGAAGCAATCATCAAGGAGGGGAAGGATTTAGAAATGGAAGGAACAGGTGCAAAGGAGGAAACCCTACCACCGGGATTTCGATTTCATCCTACAGATGAAGAACTTGTCACTTGCTATCTCGTAAACAAGATATCGGATTCTAATTTTACAGGCAGAGCAATAACTGATGTAGATCTCAACAAATGTGAGCCATGGGAGCTTCCAGGGAAGGCGAAGATGGGAGAAAAAGAATGGTACTTCTTCAGTCTTAGAGACCGTAAATACCCTACGGGTGTGAGAACCAATCGAGCAACGAACACAGGGTATTGGAAGACCACAGGGAAAGACAAGGAGATCCTGAACAGTGCAACATCGGAGTTGATTGGCATGAAGAAGACTTTAGTTTTCTACAAAGGCAGAGCTCCCAGAGGAGAGAAAAGCAACTGGGTCATGCATGAATACCGCATTCACTCAAAATCAACCTTTAGAATCAACAGGCATGATGAATGGGTGGTTTGCCGGGTATTCAAGAAGAGTGGTGGTGCAAAAAAGTACCCTTCTTCGAACCATGCAAGAGTAGTGAATCCTTACAGCTTGGAAATTGGACCAAATGTCATGCCACCATCAATGATGCAATTGGGAGATCCTGCTGCTCATTTCCTCTATGGACGGAATTACATGAACAGTGCAGACTTAGCTGAACTTTCTAGGGTTCTAAGAGGAGCTGGATCAACCAGCAGTGTCAACCCGCCAATACTACCCCACTTGAGCTACCCTACATCAGCATCAGCAGGAGGAGGATTCACCATTTCAGGCCTCAATTTGAATCTAGGAGGAGGAGGAGGAGGAGCAACTGCCACAACACAACCCATTTTGCGGCCAATGCAACCTTCTCAAGTACTTGATGTCAATTCCGGCATGATGATAACTACTTCTGTTGGTGCTGAGAATGTAGGTTATGGATCAGAAATGAATAACATCAATTCTCATGGGAATAATAGGTTTATGGGCATGGACCATTGCATGGATCTAGACAACTATTGGCCTTCCTACTAA 1179 0.4419 MEGITFLLRIYKGKTTGLCMQLEGEDPHLVEASETLSFAFFFVIFKEKEAIIKEGKDLEMEGTGAKEETLPPGFRFHPTDEELVTCYLVNKISDSNFTGRAITDVDLNKCEPWELPGKAKMGEKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEILNSATSELIGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRINRHDEWVVCRVFKKSGGAKKYPSSNHARVVNPYSLEIGPNVMPPSMMQLGDPAAHFLYGRNYMNSADLAELSRVLRGAGSTSSVNPPILPHLSYPTSASAGGGFTISGLNLNLGGGGGGATATTQPILRPMQPSQVLDVNSGMMITTSVGAENVGYGSEMNNINSHGNNRFMGMDHCMDLDNYWPSY 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11227g00004 392 ProSiteProfiles NAC domain profile. 70 219 IPR003441 GO:0003677|GO:0006355
Mupr11227g00004 392 FunFam NAC domain-containing protein 100-like 79 223 - -
Mupr11227g00004 392 Pfam No apical meristem (NAM) protein 71 197 IPR003441 GO:0003677|GO:0006355
Mupr11227g00004 392 SUPERFAMILY NAC domain 64 219 IPR036093 GO:0003677|GO:0006355
Mupr11227g00004 392 Gene3D NAC domain 79 222 IPR036093 GO:0003677|GO:0006355
Mupr11227g00004 392 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 67 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11227g00004 Mupr-Chr11227 32093 34976 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11227g00004 66 392 NAC Transcription Factor Family AT2G24430 51.714 2.71e-112 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr11227g00004 NAM 2.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11227g00004 - - gmx:100804931 611.298