Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11223g00004 ATGGCAAAGATGAGGTTATCAGGTTTGGTTTTTTTGGTTTTGTTGTGCAAGTACTGTGTTCAGGTTCAAGGTGACGATGATGATCATGCTAGAAAATTCATTACGTGGGACGACTTCATGGTGGATGAACAAGGTACAGCATCCAATGTTGGTGGTCGAGTTATTGTGGTCGATCAAACTGGTAATGGAGATTCAACAACTGTTCAAGGGGCTATAGATATGGTTCCCCATAACAACACAGAAAGGGTCAAGATATACATTTATCCCGGAACTTATAGAGAAAGAGTGCATGTGCCGAAAAGCAAGCCGTTTATTTCATTTATAGGCAAACCTAATATAACAATGAATGGCAATGAGGCATATATAACGGTCAATGCCAACGCACTAAATATAACAGACATTGCCAACGCCATACCTATTATCACAAATAGTACTAAGGCATCAGACAAAGGTTCCGATGGCCAAGAAATGGGCACGGTTAGTACAGCAACTGTATGGGTAGAATCTGATTTCTTCTGCGCAACTTTTCTTACAATTGAGAATTTGGTAGATAAAGATGCAGATAAACGTCAAGCAGTAGCGTTGCGGGTAGATGGTGATAAGGCTGTATTCTACCGAGTTAGGCTTGTAGGGGAGCAGGACACCCTCTTGGATAACACAGGAATCCATTATTTCTACCGAAGTTACATTCAAGGATCCGTTGATTTTATATGTGGCAACGCAAAATCATTGTTCTACGAGTGTGAACTATACTCTGTAGCTGAATTTGGGGGAGCAATTGCAGCTCATCACAGGGATTCAGCAGATGAAGATACAGGGTTTTCATTTGTTAATTGCACAATCACAGGAAGTGGTAGTATCTTTCTTGGGAGAGCTTGGGGGGAGTATGCAACAACAGTATATTCCTACTGTGACATGGATGATATTATTAATCCCTCGGGATGGACCGATTGGGATAATCCATCTAGACAAGGGACTGTGATGTTTGGGGAATATGGATGTTCGGGAAAAGGATCAAACAGAACTGAAAGGGTGGAATGGTCAAAAGCTTTAAGCATTGAGGAAGCTATGCCTTTCTTGGGTAAAGACTACATATATGGAGACGAATGGCTTAGACTTTAA 1122 0.4127 MAKMRLSGLVFLVLLCKYCVQVQGDDDDHARKFITWDDFMVDEQGTASNVGGRVIVVDQTGNGDSTTVQGAIDMVPHNNTERVKIYIYPGTYRERVHVPKSKPFISFIGKPNITMNGNEAYITVNANALNITDIANAIPIITNSTKASDKGSDGQEMGTVSTATVWVESDFFCATFLTIENLVDKDADKRQAVALRVDGDKAVFYRVRLVGEQDTLLDNTGIHYFYRSYIQGSVDFICGNAKSLFYECELYSVAEFGGAIAAHHRDSADEDTGFSFVNCTITGSGSIFLGRAWGEYATTVYSYCDMDDIINPSGWTDWDNPSRQGTVMFGEYGCSGKGSNRTERVEWSKALSIEEAMPFLGKDYIYGDEWLRL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11223g00004 373 SUPERFAMILY Pectin lyase-like 52 371 IPR011050 -
Mupr11223g00004 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 44 372 - -
Mupr11223g00004 373 FunFam Pectinesterase 50 373 - -
Mupr11223g00004 373 Gene3D - 53 373 IPR012334 -
Mupr11223g00004 373 Pfam Pectinesterase 144 368 IPR000070 GO:0030599|GO:0042545
Mupr11223g00004 373 Pfam Pectinesterase 55 110 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11223g00004 Mupr-Chr11223 23596 26181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11223g00004 9 324 Carbohydrate Esterase AT5G55590 52.199 4.00e-113 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11223g00004 K01051 - gmx:100812850 649.432