Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11208g00001 ATGGCGGTGCTGCTGAGAATGGCTCAGCCTCACAATGGTAACAACAACAGTGCGAACCAGCAATTGGTCCTCCATGACTTTCTGGGCATGAAGCCCGCCGCCGATTCCCCTAAAACCGCCGATGTCAGACTACCTGAGCCTTCCGCCTCCGCCTCCTCCGCCGGAGCACGCGGCCCTTTCTCCGCCACCTCCGACATCGCTTCCGAGAAACAGGTAGGAAATCATCTCGAGGGAGTTCCATTCTATGGACCGAGGAGTGATTTTTCTGGCGCTGAGATAAGTAACAGATTAGTGGGAACTAAGAGAAGTAATTCTGATTCCACTTTTATGGGTTCCTCTAGAGATGCCTTCCAAATGGTCCCAGATTCCTTTCAAAACTCACATTTGATGAAGGTTCTCAGGAATGCGGCTGGAGGAGAGAGGTCTAGAAGGCCCAATGATGATGAAGTGTTACATGGTATGCAGTCAATGAAGCCATCTTCTTCTCAGATATTTCAGCCTCCCACCAGCACTAAGATTGATGCCAGTAAATGGGAACGATCTATTCTCATGAATGTTGGCCCTTCCATGCAGCATCCACCGCGTGGGGGGCAATTGGTACCTTTTGCACACCAAATGGCTTCAAGCAAGATTAGGGATACCAATGCTGGCCCTTCTTTCATCTCTCAGTCTGCTGCTGATGAAGGATCTCGAACTGGAATCAAGGGCCCTGGAATTTTAAGTTCTATAAACACAACTGCTACAGCCTCTGACAAAACTTCATCTGTAGTGCTGCTTGGTGGCAGCAGGCCAAAGCCTGTAACTAATATAATAGAATCGTCCACGCCTCCAAGCAGTCAACATATGATGTCTGCCAGCCGCCAGATGACTATTTTTTACGGTGGCCAAGCTCATGTTTTTGATGATGTCCATCCTCATAAGGCAGATGTTATAATGGCTTTGGCCGGGTCAAATGGTGGATCTTGGTCCACTGCATTCTCGCCTAAATCTGCTGTAAAGATGGTTAATGATGGTAACTTGCACAGTGGAGAAAATGAAACAGGTGTAGCGAGTAATGTGGCATTCCCACAGGAGCTTCATGGGAAATTGTCTATTACTGGCAGTTCTAGTCATGCCATCGTCGGGCCTGGTGATCGAGTATCTACTCCAGCAGGGGCACACCAAGGAAGCGTTTTTGCTAAAGATACAAGAAATCCGGTCCAGCCACCAGATCCCACTTCTGAAGACAAAAGAGCACAGTGA 1242 0.4847 MAVLLRMAQPHNGNNNSANQQLVLHDFLGMKPAADSPKTADVRLPEPSASASSAGARGPFSATSDIASEKQVGNHLEGVPFYGPRSDFSGAEISNRLVGTKRSNSDSTFMGSSRDAFQMVPDSFQNSHLMKVLRNAAGGERSRRPNDDEVLHGMQSMKPSSSQIFQPPTSTKIDASKWERSILMNVGPSMQHPPRGGQLVPFAHQMASSKIRDTNAGPSFISQSAADEGSRTGIKGPGILSSINTTATASDKTSSVVLLGGSRPKPVTNIIESSTPPSSQHMMSASRQMTIFYGGQAHVFDDVHPHKADVIMALAGSNGGSWSTAFSPKSAVKMVNDGNLHSGENETGVASNVAFPQELHGKLSITGSSSHAIVGPGDRVSTPAGAHQGSVFAKDTRNPVQPPDPTSEDKRAQ 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11208g00001 413 Pfam tify domain 284 316 IPR010399 -
Mupr11208g00001 413 MobiDBLite consensus disorder prediction 370 413 - -
Mupr11208g00001 413 MobiDBLite consensus disorder prediction 34 61 - -
Mupr11208g00001 413 SMART tify_2 282 317 IPR010399 -
Mupr11208g00001 413 MobiDBLite consensus disorder prediction 137 151 - -
Mupr11208g00001 413 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 88 351 IPR040390 -
Mupr11208g00001 413 MobiDBLite consensus disorder prediction 136 170 - -
Mupr11208g00001 413 MobiDBLite consensus disorder prediction 155 170 - -
Mupr11208g00001 413 ProSiteProfiles Tify domain profile. 282 317 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11208g00001 Mupr-Chr11208 8458 15474 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11208g00001 21 315 Tify Gene Family AT4G32570 41.667 1.86e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mupr11208g00001 tify 2.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11208g00001 - - gmx:100807222 720.694