Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11199g00002 ATGGGGTGCATAATTTCCAAGAAAGCAGCTGTTAATGACAGCAGGGAAGGTGTGGCAAGGGAAAAATTGACTTCATCTAGCAAAAGGGCCTCGAGGATGAGGGTTGCTGCATTGAATTCCAAGAAAAGGGTCGATGGAGTTTTGGGCAAAGATGAGGTTTTAGATGGTGCTGATATGAAAGTTTCATTAATTGACAAGAAATCCGATGGTTCGATTCGGTTGTGTGATGATCAGAATGGGAAGAAGAAGGAGAAGGAGAAGGAGAAAGCTGAATTGACTGTTGTTGATTATCCTGGTCTTGGAAGGGTTTCAAAGGGTTTGGAAGGAGAGCAAGTTGCAGCAGGGTGGCCAACTTGGCTTTCTTCTGTTGCTGGTGAAGCTATCCAAGGGTGGATTCCACGAAGTGCAAATGATTTTGAGAGGTTTAATAAAATTGGACAAGGAACCTACAGTACTGTGTATAAGGCACGTGATTTGACTCACCAAAAGATTGTTGCATTGAAGAGGGTACGGTTTGATAATTTTGATGCTGAGAGTGTCAAGTTCATGGCAAGGGAAATCCTTGTTCTGCGTAGGCTTGACCATCCAAATGTAATAAAGTTGGAAGGCTTGATAACATCGCAGACATCTCGCAGCTTGTACCTTATTTTTGAATACATGGAACACGATCTTACAGGACTTGCATCAAGTCCTAACATTAAATTTTCTGAACCACAGATTAAATGCTACATGCAGCAGCTTCTTAGTGGATTGAATCATTGTCATAGACGTGGTGTTCTCCACCGCGACATAAAGGGCTCAAATCTTCTCATTGACAATAATGGCATCTTAAAGATTGCAGACTTTGGTTTGGCAAATTTTATGGACCCACATCACAATGTTCCATTGACCAGTCGTGTAGTAACTCTGTGGTATAGACCACCAGAACTTTTACTTGGAGCATCTAACTATGGGGTTGGTGTGGATTTGTGGAGCACTGGTTGCATACTGGGGGAACTATACTGTGGCAGGCCTATATTGCCTGGAAAAACAGAGGTTGAGCAATTGCATAGGATTTTTAAACTCTGTGGCTCACCATCTGAGGACTATTGGCGTAAGCTACGGTCACCGCATTCAACAGTATTCAGGCCTCCCCACCATTACAGGCGTTGTGTTGCTGAAACATTTAAAGAATATCCATCTGTTGCCACAAGACTTATAGAAACACTACTTTCTTTAGATCCCACACTTCGAGGAACAACAGCTACAGCCCTAAAGAGTGAGTTATTTTCATCAGAACCTCTTCCTTGTGATCCATCAAGTTTACCAAAATATCCTCCAAGTAAAGAGATTGACATTAAATTCGGGGAAGAAGCAACAAGGCAAGGAGCTAATGGGGGAAAGGAGCAAAAATTTGGACCAGGAGTTCCACAAGAGAAAAAACCTCAGACATTTAAATCATCCAAAATCAATGCTGACTCTCGCATATTAATGCAGCAAGAGAAAGGCCTTCCAAACTCAAGGAGCCGGAATGAATTCTTCAACCCTCATAGAGAACTCGTGTCTGGACATTTGGTTTTTCCACAGAAACAGTCAGAGGACCATAAAGAAACGATAAATTATTTCTCCGGGCCTCTTTATCAGAGGCCTATGTATTCAGGTCCATTGGTTCCAGGTTATGGCTTGGAAATGGCTGGAAAAGAAGCTGGTGAGTGGCTTCCTGTTTCAAAAAAAGTCAACCTACCAAAACTTTCTGGGTTAGTATCATCTAGGACTTCTTCGTCTCGAGATCAAAAAGAAAACCCAGTTCCCTTAGGGCCCCGAGAAACAATTCAAGTACAGAAACCTTTGGAGGCAACTAATGGATCAGAGTCAAGAAGAAGGCATGATAAAAAACGCCAGTCTCAGAGAAATGATCTAAGGCAGATAGAAAACGGAAAAGTCTCAACTGAAACATTAATTCAGGACGGACATGGATCCAGGGGAAACAATATCTACCTTTCTGGTCCATTACTGGTTTCATCAAACAATATGGATCAGATGCTCAAAGAGCGCGATCGAAAGATCCAAGAACATTCAAGACGAGCACGAATTTACAAGTCAGGTGAGAAAGCTCGTGCTAAGCAAAATTAG 2112 0.4223 MGCIISKKAAVNDSREGVAREKLTSSSKRASRMRVAALNSKKRVDGVLGKDEVLDGADMKVSLIDKKSDGSIRLCDDQNGKKKEKEKEKAELTVVDYPGLGRVSKGLEGEQVAAGWPTWLSSVAGEAIQGWIPRSANDFERFNKIGQGTYSTVYKARDLTHQKIVALKRVRFDNFDAESVKFMAREILVLRRLDHPNVIKLEGLITSQTSRSLYLIFEYMEHDLTGLASSPNIKFSEPQIKCYMQQLLSGLNHCHRRGVLHRDIKGSNLLIDNNGILKIADFGLANFMDPHHNVPLTSRVVTLWYRPPELLLGASNYGVGVDLWSTGCILGELYCGRPILPGKTEVEQLHRIFKLCGSPSEDYWRKLRSPHSTVFRPPHHYRRCVAETFKEYPSVATRLIETLLSLDPTLRGTTATALKSELFSSEPLPCDPSSLPKYPPSKEIDIKFGEEATRQGANGGKEQKFGPGVPQEKKPQTFKSSKINADSRILMQQEKGLPNSRSRNEFFNPHRELVSGHLVFPQKQSEDHKETINYFSGPLYQRPMYSGPLVPGYGLEMAGKEAGEWLPVSKKVNLPKLSGLVSSRTSSSRDQKENPVPLGPRETIQVQKPLEATNGSESRRRHDKKRQSQRNDLRQIENGKVSTETLIQDGHGSRGNNIYLSGPLLVSSNNMDQMLKERDRKIQEHSRRARIYKSGEKARAKQN 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11199g00002 703 ProSitePatterns Protein kinases ATP-binding region signature. 145 168 IPR017441 GO:0005524
Mupr11199g00002 703 PANTHER CELL DIVISION PROTEIN KINASE 138 429 - -
Mupr11199g00002 703 MobiDBLite consensus disorder prediction 634 656 - -
Mupr11199g00002 703 SMART serkin_6 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11199g00002 703 FunFam probable serine/threonine-protein kinase At1g54610 222 463 - -
Mupr11199g00002 703 FunFam probable serine/threonine-protein kinase At1g54610 126 221 - -
Mupr11199g00002 703 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Mupr11199g00002 703 MobiDBLite consensus disorder prediction 579 656 - -
Mupr11199g00002 703 Pfam Protein kinase domain 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11199g00002 703 CDD STKc_CDK9_like 139 423 - -
Mupr11199g00002 703 Gene3D Transferase(Phosphotransferase) domain 1 222 460 - -
Mupr11199g00002 703 MobiDBLite consensus disorder prediction 579 593 - -
Mupr11199g00002 703 MobiDBLite consensus disorder prediction 614 633 - -
Mupr11199g00002 703 ProSiteProfiles Protein kinase domain profile. 139 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr11199g00002 703 MobiDBLite consensus disorder prediction 678 703 - -
Mupr11199g00002 703 MobiDBLite consensus disorder prediction 456 481 - -
Mupr11199g00002 703 SUPERFAMILY Protein kinase-like (PK-like) 132 431 IPR011009 -
Mupr11199g00002 703 Gene3D Phosphorylase Kinase; domain 1 126 221 - -
Mupr11199g00002 703 Coils Coil 698 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11199g00002 Mupr-Chr11199 7900 13359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11199g00002 131 465 Core Cell Cycle Gene Families AT5G10270 48.718 5.79e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mupr11199g00002 Pkinase 2.6e-66 CL0016