Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11199g00001 ATGTTTAAGAAAAAAGTAGAAAAAGGAAAGAGAATCGTCATCATTGGTGTGTCAACCTTATTGTTGGTGGCTATAGCTGTGGCTGTCATACTTGGTGTCAACATAAGTGTGACTAAAAAAGATTTAGATGATGATATTGAGGAAAACAAGAAGAACCATTTACATACCAAGATACTTGTTTGGATGGGTTTGAGAATACCACTAGTGAAGTTGTCCCACAAGCCTAATGTGACTGTAGCCAAAAATGGCAATGGAGATTTCAAAAGCCTCAATGAAGCATTGAAGCAAGTGCTAAAGAAAAATCAAAATCCATTTGTGGTCTACATCAAGGAGGGCATTTACCAAGAGTATGTTAAAGTCAAAAAGGAAATGACCCATGTGGTGTTTATTGGTGAAGGTGGAAAAGAACACGAATAA 417 0.3669 MFKKKVEKGKRIVIIGVSTLLLVAIAVAVILGVNISVTKKDLDDDIEENKKNHLHTKILVWMGLRIPLVKLSHKPNVTVAKNGNGDFKSLNEALKQVLKKNQNPFVVYIKEGIYQEYVKVKKEMTHVVFIGEGGKEHE 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11199g00001 138 Pfam Pectinesterase 76 135 IPR000070 GO:0030599|GO:0042545
Mupr11199g00001 138 SUPERFAMILY Pectin lyase-like 74 134 IPR011050 -
Mupr11199g00001 138 Gene3D - 37 138 IPR012334 -
Mupr11199g00001 138 PANTHER PECTINESTERASE 51 134 - -
Mupr11199g00001 138 ProSitePatterns Pectinesterase signature 1. 101 120 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11199g00001 Mupr-Chr11199 1020 1948 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11199g00001 61 133 Carbohydrate Esterase AT5G49180 52.632 1.94e-19 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11199g00001 K01051 - gmx:100777691 109.383