Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11193g00002 ATGTATTTCTCTTTCTCCTTTGATATTTCTGACTCTCCTTATTATTATAACCCAACAAACAAAGCCACCCTTTTTTTGAACTCACAACACAACATCGCTCTCACAAAAATGGATAATAATGGTTCTTTCTCTTCCCCAAGACGTGATTTTCCTGCTGGCCTGCGAGTTCTCGTTGTCGATGATGATCCAACGTGGCTTAAGATCCTTGAGAAGATGCTCAAGAAGTGCAATTATGAAGTGACTACATGTTGTTTGGCAAGGCATGCTCTAAACCTGCTTCGCGAAAGGAAGGACGGATATGATATAGTGATCAGCGATGTAAACATGCCTGACATGGATGGTTTTAAACTTCTTGAACATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGGGAAACAAGCAGGGTGATGAAAGGCGTTCAACACGGAGCGTGTGATTATCTCCTTAAGCCTATAAGGATGAAAGAACTTAGAAATATATGGCAGCATGTCTTTAGAAAAAGGATACACGAGGCAAGAGAATTTGAAAGTTTTGAGAGTTTTGAGAGCATTCACTTGATGAGAAATGGATCAGAGCAGTCAGATGATGGCAACCTTTTTGCTATAGAAGATGTGACCTCAACAAAGAAAAGAAAAGATGCAGATAACAAACTCGACGACAAAGAATTTTTGGATCCATCTTCCACCAAGAAAGCGAGAGTAGTCTGGTCTGTAGATCTTCATCAGAAGTTTGTTAAAGCGGTGAATCAGATTGGATTTGATAGTAAGTTTCCTCTCAAGGTTCCGTATAAAGTCTTGTTTGGAATCATCACTGTCACTTGTATAGATCTTGTTGTTATGCTTAACCTGTCAGGCATAATATTTTATGCATCTAAAGTTGGTCCCAAGAAAATTCTAGATTTGATGAATGTTCCATGGCTGACTAGAGAGAACGTTGCTAGCCACTTGCAGAAATACCGGCTTTATTTGAGTAGGATTCAGAAAGAAAACGATCAAAGATCTTCCTCAAGTGGAATGAAGCATTCAGACTTTCCTTCAAAAGATCTGGGGAGTTATTGTCTTCAGAACTCAGTAAACAAGCAACAAAACGATGTTTCAATCGACAGCTACAATTACTCGGATGGAACGTTACAAATTCAAAACGTGGAAACTGAAAGTCATGAAGGTGATCCCAAGGGAATAGTTTCACAGTCCACCATAGCAAAGAAAGGAAGGGCATTGACTGGTAACATTGGTGACACAAACATGAGAGAGAGTTTAAGGGTTGGCCTTAATCAACCTTTTGTCCCTCTGGAGTCAGAAGGAAACCATGCAGTGTTTGATTGCTCCATGCCAACACAGTACTCTTGGACTGAAGTTCCACACATGCAACACAAAGAAGAACACAAGTCACTTGTTCATTTAGAGGATAGCTTCAAGCAGTTGCCATCATTACATGGTAAGCAGCATCACATCCAAGTTGATCAATCACAATCAGTTGCTTCAATTAGTTCCACTCCCTCTATAACGGAGGAAGAGGTTGCTGCTTGTATAGAAGCAAAACCTTTGTTTGCAGATTACAAGAATGATTATGCCAGTTCTGTGAGTTCAATAGGGAATGCCCTTATGGTGAATGATCAATCTTCAGAACTCATTTCCACTACAAATTCTGGCTTGAAAACACAGGGATATAATAATCTCAGTTGCATTTCTGATCTGGAAATTTACCAAAGAAACCTTCTTTTGGGAGGTGAGGCAGCTTCTGCACCTTTGGAGGAGGACTTGCATTTCTATTGGCTACAACAAGGTGAATGCTATAATATGAACTTCGGTCTGCCGAATATAGGAATGTCTGAATATTATGATCCAGGGTTTATTACAGAAGCTCCAACCCACTTATATGATTCAGCTGATTACTCAGTTATAGATCAAGGTCTATTCATAGCATGA 1944 0.3981 MYFSFSFDISDSPYYYNPTNKATLFLNSQHNIALTKMDNNGSFSSPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALNLLRERKDGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRIHEAREFESFESFESIHLMRNGSEQSDDGNLFAIEDVTSTKKRKDADNKLDDKEFLDPSSTKKARVVWSVDLHQKFVKAVNQIGFDSKFPLKVPYKVLFGIITVTCIDLVVMLNLSGIIFYASKVGPKKILDLMNVPWLTRENVASHLQKYRLYLSRIQKENDQRSSSSGMKHSDFPSKDLGSYCLQNSVNKQQNDVSIDSYNYSDGTLQIQNVETESHEGDPKGIVSQSTIAKKGRALTGNIGDTNMRESLRVGLNQPFVPLESEGNHAVFDCSMPTQYSWTEVPHMQHKEEHKSLVHLEDSFKQLPSLHGKQHHIQVDQSQSVASISSTPSITEEEVAACIEAKPLFADYKNDYASSVSSIGNALMVNDQSSELISTTNSGLKTQGYNNLSCISDLEIYQRNLLLGGEAASAPLEEDLHFYWLQQGECYNMNFGLPNIGMSEYYDPGFITEAPTHLYDSADYSVIDQGLFIA 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11193g00002 647 Pfam Response regulator receiver domain 56 165 IPR001789 GO:0000160
Mupr11193g00002 647 CDD REC_typeB_ARR-like 56 170 - -
Mupr11193g00002 647 ProSiteProfiles Response regulatory domain profile. 55 170 IPR001789 GO:0000160
Mupr11193g00002 647 SUPERFAMILY CheY-like 53 185 IPR011006 -
Mupr11193g00002 647 FunFam Two-component response regulator 54 215 - -
Mupr11193g00002 647 NCBIfam myb-like DNA-binding domain, SHAQKYF class 296 326 IPR006447 GO:0003677
Mupr11193g00002 647 SUPERFAMILY Homeodomain-like 234 330 IPR009057 -
Mupr11193g00002 647 SMART REC_2 54 166 IPR001789 GO:0000160
Mupr11193g00002 647 PANTHER TWO-COMPONENT RESPONSE REGULATOR 54 355 IPR045279 GO:0009736
Mupr11193g00002 647 Gene3D - 232 332 - -
Mupr11193g00002 647 Gene3D - 54 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11193g00002 Mupr-Chr11193 6766 10832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11193g00002 50 339 Response Regulator Gene Family AT2G25180 49.488 1.73e-75 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mupr11193g00002 Response_reg 1.8e-24 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11193g00002 K14491 - gmx:100797421 984.556