Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11191g00001 ATGGTGTGCTTGAAAAAACGCAAATGCGGGACCAAACATGTAAGAGAGAAGATAATTACTGTTCTGACCAACATGGTGCAATCAAAGAAGTTCAGAGGTGTCAGGCAACGCCATTGGGGCTCGTGGGTTTCTGAGATTCGTCACCCATTATTGAAGAGAAGGGTGTGGCTTGGGACATTTGGAACAGCTGAAGAAGCAGCTAGAGCATATGATGAGGCAGCCATTTTGATGAGTGGAAGAAACGCGAAAACAAACTTCCCAGTTGGTGATAGTAAAATGGGGAATGACAGTTCAAGTTCAGTTCTGAATGCAAAGTTGAGGAAGTGCTGCAAGTCCCCTTCACCTTCCCTCACTTGCCTAAGGCTTGACACTGAGAATTCCCACTTGGGGGTGTGGCAGAAGCGTGCAGGGCCTCGTTCTGAATCAAACTGGATTATGAGGGTTGAGTTGGAAACCAAGAATATTAATCTCACAGGTTGTGATCATTCACAAGTGTCTGTCAAAGCAGATGAAAGCAACAATGTGTTGGATGAGGAGCAAAAGATTGCCTTGCAGATGATAGAAGAGCTTCTCAATAGGAATTGA 585 0.4496 MVCLKKRKCGTKHVREKIITVLTNMVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFGTAEEAARAYDEAAILMSGRNAKTNFPVGDSKMGNDSSSSVLNAKLRKCCKSPSPSLTCLRLDTENSHLGVWQKRAGPRSESNWIMRVELETKNINLTGCDHSQVSVKADESNNVLDEEQKIALQMIEELLNRN 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11191g00001 194 PRINTS Ethylene responsive element binding protein signature 53 69 IPR001471 GO:0003700|GO:0006355
Mupr11191g00001 194 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Mupr11191g00001 194 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Mupr11191g00001 194 Gene3D AP2/ERF domain 29 88 IPR036955 GO:0003700|GO:0006355
Mupr11191g00001 194 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 26 153 - -
Mupr11191g00001 194 SUPERFAMILY DNA-binding domain 30 88 IPR016177 GO:0003677
Mupr11191g00001 194 Pfam AP2 domain 30 78 IPR001471 GO:0003700|GO:0006355
Mupr11191g00001 194 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Mupr11191g00001 194 CDD AP2 29 88 IPR001471 GO:0003700|GO:0006355
Mupr11191g00001 194 FunFam Ethylene-responsive transcription factor 2 29 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11191g00001 Mupr-Chr11191 3707 6526 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11191g00001 25 194 AP2-EREBP Transcription Factor Family AT1G15360 60.302 4.29e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr11191g00001 AP2 7.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11191g00001 - - gmx:100778381 270.011