Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11153g00001 ATGGCTTGTGGAACTGTCAACCTTCCTCCTGGCTTTTCCTTCTCTCCAACTGATCAAGAACTCGTCCTTCACTTTCTTTATTCCAAGGCTTCTATGCCATGCCACCCCAACATTATTCCAGAGCTTGACCTCTCCCTGCTTCATCCATGGGAATTAAATGGTAAGGCGCTATCAAGTGGAAATCAACACTATTTGTTCACGAAAGTGAAGGAAAAAAGATCGACAGAAAATGGGTATTGGAAGGAAATAGGAATGACAGAAGCTATAGTATCCGGGTCTGAAAAAGTGGGGATGAAGAAGTACCTAGTGTTCAACCTCGGTGAAGCTCCACAAGGCACTGAAACCAGTTGGTTCATGCAAGAATATCATATTTCCTCATCCGGGTTTAGCACTGCATCTTGTGGAAGTACTCGCGGAAGACGAAAACCTGATCAAAGTAGGAGCAAATGGGTATTGTGTAGAGTGTATGAGAACAAGAGTTGTCAATCCCAACACAGCGATGATGAGGATGACAGCGGAACTGAGCTTTCATGGCTAGACGAGTTTTATATGTCTTTAGATGATGATCTTGAAGAAATTATAAGCCTGCCTAATTAG 597 0.4305 MACGTVNLPPGFSFSPTDQELVLHFLYSKASMPCHPNIIPELDLSLLHPWELNGKALSSGNQHYLFTKVKEKRSTENGYWKEIGMTEAIVSGSEKVGMKKYLVFNLGEAPQGTETSWFMQEYHISSSGFSTASCGSTRGRRKPDQSRSKWVLCRVYENKSCQSQHSDDEDDSGTELSWLDEFYMSLDDDLEEIISLPN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11153g00001 198 Pfam No apical meristem (NAM) protein 9 124 IPR003441 GO:0003677|GO:0006355
Mupr11153g00001 198 Gene3D NAC domain 17 162 IPR036093 GO:0003677|GO:0006355
Mupr11153g00001 198 PANTHER NAC TRANSCRIPTION FACTOR 56 8 169 - -
Mupr11153g00001 198 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
Mupr11153g00001 198 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11153g00001 Mupr-Chr11153 3439 4570 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11153g00001 1 162 NAC Transcription Factor Family AT1G61110 40.462 3.42e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr11153g00001 NAM 7.7e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11153g00001 - - gmx:100779578 341.273