Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11148g00001 ATGGGAAGGGCTCCTTGTTGCGAGAAAGTGGGGTTGAAAAAGGGGAGGTGGACAGCAGAGGAGGATGAGAAATTGGCAAAATACATTCAGACCAATGGGGAAGGTTCTTGGAGGTCATTGCCTAAGAATGCAGGATTATTAAGGTGCGGGAAAAGTTGCAGGCTCAGATGGATTAACTATTTGAGAGCTGACCTCAAAAGAGGCAACATTTCTGTTGAAGAGGAAAATACCATCGTTAAGATGCACGCTTCTTTTGGCAACAGGTGGTCTTTGATAGCAAGTCACTTGCCAGGAAGAACGGACAACGAGATAAAAAACTACTGGAATTCTCACCTGAGCAGGAAAATTTACAGCTTCACGAGGGTAGAGACCCAAGCAGGTGGAGGGGTCATGGACTCACCCAAAGTAACACCTAATCCTTCCAAACGCAAAGGTGGTAGAACAAGCCGTTGGGCAATGAAGAAGAACAAAACCTACGCTCAAAATGATACCCGGAGGCCCAAACAGATTAGAGACGCCGAAGTTCCATCGCTAGAGAGCGAGGGTCCCTCTAACGCTGACGTGGCAGAGGTTGGTGAGCCAATAAGAGAGGAGGCGGTGGTAATTAGAACACCCGAGAAGAGCCTTGACGGTGTGGAACAAAGTACCGATGACGACATCTTGGGTCTGTGTCAATTGGAGGGTATTAATGAGGGTAGTGGGGCGTTGGGTTTTAGTGATGACATGTTGGAAAGTTGTTTGCCAGAAACTTGTGGGGCTTGGAACTTAAGTAAAGAGAGAGAAAGCAATGAGGTGGTGGGTGTTGGTGGGGAAAATGGAAGGAACAAAATGGCATCGAGTGAGACTAGTGTGAACGGGGAAAGTGGACAATGGTATTCTTGCTCTTCCATGGCCTTGGGTTTCGATCAAAACTGGGATTGGGAGAGCCTCGTGGAGTATAATAATTTTGATGAGTCCGAAGCTTACAATTGGGAGCATCGAGAAAACCTGCTCACTACGCTCTGGGAAGACGATGACTGGGAAAGCGATGCCAAGAAAACGGGAGAGACAGATTCTCAGCTACAAAACGACATGGTCGCTTGGTTACTCTCTTGA 1095 0.4749 MGRAPCCEKVGLKKGRWTAEEDEKLAKYIQTNGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISVEEENTIVKMHASFGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYSFTRVETQAGGGVMDSPKVTPNPSKRKGGRTSRWAMKKNKTYAQNDTRRPKQIRDAEVPSLESEGPSNADVAEVGEPIREEAVVIRTPEKSLDGVEQSTDDDILGLCQLEGINEGSGALGFSDDMLESCLPETCGAWNLSKERESNEVVGVGGENGRNKMASSETSVNGESGQWYSCSSMALGFDQNWDWESLVEYNNFDESEAYNWEHRENLLTTLWEDDDWESDAKKTGETDSQLQNDMVAWLLS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11148g00001 364 Gene3D - 11 67 - -
Mupr11148g00001 364 Gene3D - 71 116 - -
Mupr11148g00001 364 CDD SANT 16 61 IPR001005 -
Mupr11148g00001 364 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mupr11148g00001 364 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Mupr11148g00001 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mupr11148g00001 364 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mupr11148g00001 364 FunFam Myb transcription factor 11 67 - -
Mupr11148g00001 364 FunFam Myb transcription factor 71 116 - -
Mupr11148g00001 364 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mupr11148g00001 364 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mupr11148g00001 364 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mupr11148g00001 364 CDD SANT 71 112 IPR001005 -
Mupr11148g00001 364 MobiDBLite consensus disorder prediction 128 187 - -
Mupr11148g00001 364 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 174 - -
Mupr11148g00001 364 MobiDBLite consensus disorder prediction 159 175 - -
Mupr11148g00001 364 SMART sant 66 114 IPR001005 -
Mupr11148g00001 364 SMART sant 13 63 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11148g00001 Mupr-Chr11148 362 4427 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11148g00001 1 188 MYB Transcription Factor Family AT5G49330 61.386 2.48e-76 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr11148g00001 Myb_DNA-binding 1.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11148g00001 K09422 - gmx:100793350 433.721