Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11145g00004 ATGGCGACGCAGATGAGTAAGAAGAGAAAGTTCGTGGCTGATGGAGTGTTCTTCGCCGAACTGAACGAGGTTCTGACGCGTGAGTTGGCGGAGGACGGTTACTCCGGCGTGGAGGTTAGGGTTACGCCGATGCGCACCGAGATCATCATCAGAGCCACCAGAACCCAAGCTGTTCTCGGTGAGAAGGGAAGGAGAATTAGGGAACTTACCTCAGTGGTGCAGAAGAGGTTCAAGTTTCCCGAGAACAGTGTCGAGCTTTATGCTGAGAAGGTCAATAAC 279 0.5269 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNN 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11145g00004 93 CDD KH-II_40S_S3 5 93 - -
Mupr11145g00004 93 ProSiteProfiles Type-2 KH domain profile. 21 92 IPR004044 GO:0003723
Mupr11145g00004 93 Pfam KH domain 20 92 IPR004044 GO:0003723
Mupr11145g00004 93 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 10 93 IPR009019 GO:0003723
Mupr11145g00004 93 Gene3D - 1 91 IPR015946 -
Mupr11145g00004 93 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 6 93 - -
Mupr11145g00004 93 FunFam 40S ribosomal protein S3 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11145g00004 Mupr-Chr11145 31739 32263 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11145g00004 1 93 Cytoplasmic Ribosomal Protein Gene Family AT2G31610 93.548 1.88e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11145g00004 K02985 - gmx:100808705 180.644