Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11143g00003 ATGACTGGGTCAAAGATGAAGAGATACCTAACCACCTACCCCAATACATATCCGTACTCACCAACCAAGCAGTACCATACCCTCTACTTAAAGCTTGAAAGGCTGTTTTTCCTCTACAAGTTTATGAACATGGCGACACAAAGTGAGAGAGACCCCCTGAAGTGGGGTGAGGCAGCGGATTCACTAAAGGGTAGCCACTTTGAGGAAGTAAAACGGATGGTGGCAGAGTACCGGAAGGCAGTGATCTGTGTGGGTGGGGGCCACACACTAACTATATCACAGGTGGCTGCTGTTGCCAACCACAGCTTGCAGGCTAAAGTTGACCTCTCTGACTCTGCAAGGCCAGGCGTTGACTCCAGCTGCCACTGGATTATGGAAAACATTAACAAAGGCACTGCCATTTATGGTGTTACCACCGGCTTTGGTGCTGCCTCCCACAGGCGAACTCAACAAGGCCTTGCTCTTCAGAAGGAAATGGTTAGGTTTTTAAACTGCGCAATATTTGGCTACGAAACAGAGTTATCTCATGCACTGCCTAAATCAGCAACGAGAGCAGCCATGCTTGTGAGGGTTAATACCCTTCTTCAAGGGTACTCAGGAATTAGATTTGAAATCTTAGAAGCAATCACCAAACTCCTCAACCACAATGTGACCCCCATCTTGCCATTACGGGGTACAATTACTGCGTCTGGTGATCTAATTCCACTGTCCTACATTGCTGCATTGCTAACTGGTAGGCGAAACAGTAAAGCTGTTGGTCCCTCTGGAGAGTCCCTCAATGCTAAGGAAGCTTTCCATTTAGCAGGTCTGCATTCTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGTGTTGCCCTCGTAAATGGCACAGCCGTTGGGTCTGGCGTAGCTTCTGTGGTGCTTTTTGAGGCAAACATATTAGCTTTATTATCAGAAGTTCTATCAGCAGTTTTTGCTGAAGTCATGCAGGGGAAGCCAGAATTTACACATCACCTTATACATAAGCTGAAGTACCATCCCGGTCAAATTGAAGCTGCCGCTATTATGGAACACATTTTAGATGGAAGCTCTTATGTCAAAAACGCTAAACTGCAACAGACAGATCCGTTGCAGAAGCCTAGAAAAGATCGTTATGCTCTGGTAACTTCTCCTCAGTGGATTGGTCCACAGATTGAAATCATCCGGTATTCGACCAAATCAATTGAAAGGGAGATAAACTCAGTCAATGACAATCCCTTGATTGATGTCGCAAGGAATAAGGCCTTGAATGGTGGTAATTTCCAAGGCACCCCAATTGGAGTTTCAATGGATAATACACGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAGCTAGTCAATGATTTGTATAATAATGGGTTGCCATCAAATCTGTCTGCTGGTAGAAACCCAAGTCTGGATTATGGTTTTAAGGCATCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATCTGGCGAATCCTGTAACGAGCCATGTGCAGAGTGCTGAGCAACACAACCAAGATGTGAATTCTTTGGGCTTAATTTCTGCTTTGAAAACTGTCGAAGCCGTTGAGATATTAAAGCTCATGTCTTCCACTTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTCAAGAAAACAGTCAAGAATACTGTAAGCAGAGTTGCAAAGGAAACATTAATTACACAAGATAGAGAAGAAATTAACCCATTTCGACTTTGTGAGAAAGATTTGCTTAAAGTGGTCGATAGAGAATACGTATTCTCTTACATCGATGATCCCTCCAACGTTACGTACCCATTGATGCCAAAACTGAAGCAAGTACTTTATGAGCAAGCACACATCAGTGCCATTAATGATAAGAATGTGAGCTTGTTGATTTTTGAGAAGATTGGAGCTTTTGAGAATGAATTGAAGTCTCTCTTGCCAAAGGAAGTTGAAGGTGCAAGGGTGGCTTATGAGAATGGCAATCCAGCAATTCCAAACAGAATTAAGGAGTGTAGGTCATATCCATTGTACAAGTTTGTGAGGGAGGAGTTAGAGATAGGGTTGCTCACAGGAGAAAAGACTCTCTCACCAGATGAGGAATTTGAAAAAGTATTTACAGCCATGTGTCAAGCAAAGATTATTGACCCAATTCTGGAATGTCTTGGAGATTGGAACGGGGTTCCCATCCCAATATAG 2226 0.4353 MTGSKMKRYLTTYPNTYPYSPTKQYHTLYLKLERLFFLYKFMNMATQSERDPLKWGEAADSLKGSHFEEVKRMVAEYRKAVICVGGGHTLTISQVAAVANHSLQAKVDLSDSARPGVDSSCHWIMENINKGTAIYGVTTGFGAASHRRTQQGLALQKEMVRFLNCAIFGYETELSHALPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIAALLTGRRNSKAVGPSGESLNAKEAFHLAGLHSGFFELKPKEGVALVNGTAVGSGVASVVLFEANILALLSEVLSAVFAEVMQGKPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYVKNAKLQQTDPLQKPRKDRYALVTSPQWIGPQIEIIRYSTKSIEREINSVNDNPLIDVARNKALNGGNFQGTPIGVSMDNTRLAVASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAVEILKLMSSTYLVALCQAIDLRHLEEIFKKTVKNTVSRVAKETLITQDREEINPFRLCEKDLLKVVDREYVFSYIDDPSNVTYPLMPKLKQVLYEQAHISAINDKNVSLLIFEKIGAFENELKSLLPKEVEGARVAYENGNPAIPNRIKECRSYPLYKFVREELEIGLLTGEKTLSPDEEFEKVFTAMCQAKIIDPILECLGDWNGVPIPI 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11143g00003 741 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 225 241 IPR022313 GO:0016841
Mupr11143g00003 741 Gene3D - 42 289 IPR024083 -
Mupr11143g00003 741 FunFam Phenylalanine ammonia-lyase 42 289 - -
Mupr11143g00003 741 SUPERFAMILY L-aspartase-like 51 741 IPR008948 GO:0003824
Mupr11143g00003 741 Gene3D - 555 676 IPR023144 -
Mupr11143g00003 741 PANTHER HISTIDINE AMMONIA-LYASE 48 741 IPR001106 -
Mupr11143g00003 741 CDD PAL-HAL 89 552 IPR001106 -
Mupr11143g00003 741 Pfam Aromatic amino acid lyase 90 561 IPR001106 -
Mupr11143g00003 741 NCBIfam phenylalanine ammonia-lyase 51 731 IPR005922 GO:0005737|GO:0006559|GO:0016841
Mupr11143g00003 741 Gene3D Fumarase/aspartase (Central domain) 290 736 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11143g00003 Mupr-Chr11143 7458 9824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11143g00003 40 741 Monolignol Biosynthesis Gene Families AT2G37040 72.973 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11143g00003 K10775 - gmx:100787872 1267.29