Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11128g00001 ATGATTACGTTCATGGACTCAAAGGAGAAATCAAAGGAGGTGGAGAAGTGTTTGGATCCTCAGCTATGGCATGCTTGTGCAGGTGGTATGGTGCAGATGCCAGCAGTGAATAGTAAGGTCTATTACTTCCCTCAGGGCCATGCCGAACATGCGTGTGGAGCGGTTAACTTCAGGAATTGTCCTAAGGTTCCACCTTTGGTTCCATGCAGAGTGTCTGCTGTCAAATTCATGGCTGATCCTGAGACTGATGAGGTCTATGCCAAACTCAGACTTGTTCCTCTGAATGCCAATGATGCTGATTACGACCGCGATGTTGTTGTTGGGGGTGAAACTCAGGACAAGCCTGCTTCATTTGCAAAAACCTTGACCCAATCTGATGCCAACAATGGTGGGGGGTTTTCTGTTCCCAGATATTGTGCGGAGACCATTTTCCCTCGTTTGGACTATTCGGCCGACCCTCCTGTTCAGAACATCCTTGCCAAGGATGTTCATGGGGAAACATGGAAATTCAGGCACATCTATAGGGGCACCCCGAGGCGGCACCTGTTGACTACCGGATGGAGTACTTTTGTGAATCATAAGAAGCTTGTTGCTGGGGACTCAATTGTGTTTTTGAGGGCAGAAAATGGGGATCTGTGTGTGGGGATTCGGCGGGCCAAGAAGGGGATTGCTGGGGGCCCTGAGGCTTCCTCAGGGTGGAACCCTGCTGGAGGAAATTGTCCTATGCCTTATGGTTCCTTTTCACCCTTTTTGAGGGAGGATGATAATAGAATCCTCAGAAATGGCTTGAACCCTAGTGTGGGTATGATGGGAAGGGGAAAAGTGAGACCGGAAGCTGTTGTTGAAGCTGCTAATCTTGCTGCCAATAAGCAACCCTTTGAGGTTGTTTACTACCCTCGTGCAAGTACTCCCGAGTTTTGTGTGAAGGCCTCTCTAGTTGAAACAGCACTGCAGATTAGGTGGTGTTCTGGAATTAGGTTTAAGATGGCCTTTGAAACGGAGGACTCCTCACGGATAAGCTGGTTTATGGGAACGATATCTTTGGTTCAGGTTGCTGATCCCCTTAACTGGCCTAACTCACCTTGGAGGCTTCTCCAGGTTACATGGGACGAACCGGATTTACTTCAAAACGTGAGGAGGGTGAGTCCATGGCTGGTTGAATTGGTGTCAAACATGCCTGCCATCCATCTTTCTCCATTCTCACCACCAAGGAAGAAATTGAGATTGCCTCAACACCTAGATTTCCCCATGGATGGCCAGATTCCTTTGCAAACATTTCCAGGCAACCTTCTAGGTCCCAGCAACACCAACCAGTTTGGATGTTTACCCGAAAGTACTCCTGCTGGCATGCAGGGAGCCAGGCATGCTCACTATGGTCTATCCTTAACGGATCTCCACCTCAATAAACTGCAGTCAGGTCTATTTCCGGCTGGTTTCCCGTCCCTTGATCACGCAGCTACGCCGCCAATGAGGGTCTACAATAACCTCACATTGCAAAAGCCCAGCATGAGTGAGAATGTCTCTTGCTTACTCTCCATGGCAAATTCTACTCAGTCTTCAAAGAAATTGGATGATGAGAAGACACCCCAGCTCGTGCTTTTCGGCCAAAAAATTCTCACCGAGCAGCAGATATCTCTGAGCAGCTCTGGTGATACATTCTCCCCAGTTCTTACAAGAAATTGTTCGTCAGATGGAAATGCCGATAAGGTGACTAATTTTTCGGACGGTTCTGGATCGGCTCTTCATCAGCAAGGCCGCTCCTCTTGTGAGAGGTTCCAGTGGTATAGAGATAACCACCAAGAAACCGAGGCCAGTTTGGAGACTGGTCACTGTAAAGTTTTTTTGGAGTCAGAAGATGTAGGCCGGACCATGGACCTCTCATTGCTTCGGTCTTATGACGAACTATACAGAAAGCTGGCAGACATGTTTGGCATAGAAAAATCCGAGATGTTAAGTCAGGTGCTGTACCGCAATATAACCGGGGCAGTCAAACACATTGGTGATGAACCATTCAGTGACTTCACAAGAACTGCCAGGAGGTTGACTATTCTAATGGATTCTGGCAGCAACAATGTAGGAGTGTAG 2085 0.4815 MITFMDSKEKSKEVEKCLDPQLWHACAGGMVQMPAVNSKVYYFPQGHAEHACGAVNFRNCPKVPPLVPCRVSAVKFMADPETDEVYAKLRLVPLNANDADYDRDVVVGGETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIAGGPEASSGWNPAGGNCPMPYGSFSPFLREDDNRILRNGLNPSVGMMGRGKVRPEAVVEAANLAANKQPFEVVYYPRASTPEFCVKASLVETALQIRWCSGIRFKMAFETEDSSRISWFMGTISLVQVADPLNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHLSPFSPPRKKLRLPQHLDFPMDGQIPLQTFPGNLLGPSNTNQFGCLPESTPAGMQGARHAHYGLSLTDLHLNKLQSGLFPAGFPSLDHAATPPMRVYNNLTLQKPSMSENVSCLLSMANSTQSSKKLDDEKTPQLVLFGQKILTEQQISLSSSGDTFSPVLTRNCSSDGNADKVTNFSDGSGSALHQQGRSSCERFQWYRDNHQETEASLETGHCKVFLESEDVGRTMDLSLLRSYDELYRKLADMFGIEKSEMLSQVLYRNITGAVKHIGDEPFSDFTRTARRLTILMDSGSNNVGV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11128g00001 694 CDD B3_DNA 117 218 IPR003340 GO:0003677
Mupr11128g00001 694 Gene3D - 605 692 - -
Mupr11128g00001 694 Gene3D - 116 220 IPR015300 -
Mupr11128g00001 694 Pfam Auxin response factor 283 366 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Mupr11128g00001 694 Pfam B3 DNA binding domain 118 219 IPR003340 GO:0003677
Mupr11128g00001 694 ProSiteProfiles PB1 domain profile. 608 688 IPR000270 GO:0005515
Mupr11128g00001 694 FunFam Auxin response factor 321 394 - -
Mupr11128g00001 694 ProSiteProfiles B3 DNA-binding domain profile. 118 220 IPR003340 GO:0003677
Mupr11128g00001 694 SMART B3_2 118 220 IPR003340 GO:0003677
Mupr11128g00001 694 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 15 686 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mupr11128g00001 694 FunFam Auxin response factor 116 220 - -
Mupr11128g00001 694 SUPERFAMILY DNA-binding pseudobarrel domain 112 219 IPR015300 -
Mupr11128g00001 694 Gene3D - 320 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11128g00001 Mupr-Chr11128 7125 10171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11128g00001 14 694 B3 DNA Binding Superfamily AT4G30080 58.032 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mupr11128g00001 B3 3.7e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11128g00001 - - gmx:100796522 1266.52