Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr11117g00002 ATGATTAACTTCGAAGAAACCGAGTTGAGACTCGGCCTCCCTGGCGGGTCCGCGAATGATCACGGCGAGTTGACACTCAAGCCCAGTGGGGGAAAAAGAGGCTTCTCTGAAACTGCTTCTGTTGATTTGAAGCTTAATCTTTCATCCAATAATGAATTGGGCTCGGCCTCGCTTTCACCCTCATCGGAGAAGCCCAAAGAGAAGACTACCGCTGCTGCACCTCCTCCTCGACCTAATGACCCAACAAAACCACCTGCCAAGGCACAAGTGGTGGGTTGGCCACCAGTTCGATCTTTTAGAAAGAACATGGTGAGTGTTCAAAGGAACAACAACGAAGAGGGAGAGAAGAGTGGTGGTAACAACAACTTCGTGAAGGTGAGCATGGATGGTGCACCCTATCTAAGGAAGGTGGACCTCAAGTTGTACAAGAGCTACCAAGAGCTGTCAGATGCGCTGGCTAAAATGTTCAGTTCTTTCACAATTGGCAAATGTGGGTCCGAAGGCATGAAGGACTTTATGAATGAGACCAAGTTGATTGACCTTTTGAACGGCTCTGATTATGTACCCACATACCAAGACAAGGACGGAGACTGGATGCTCGTCGGTGATGTGCCCTGGGAGTCACGCCAAGAGCCGTGGAAAAGTGCAAGAACAGAAGCTGAAGACATTTTAGGGTTCCGCAACAACAATCGACTTGGTTGTTCATCGGCGTCACGTGGAAGCAAATTGACTCGAGCAACATCGGGTCTAATATAG 756 0.4894 MINFEETELRLGLPGGSANDHGELTLKPSGGKRGFSETASVDLKLNLSSNNELGSASLSPSSEKPKEKTTAAAPPPRPNDPTKPPAKAQVVGWPPVRSFRKNMVSVQRNNNEEGEKSGGNNNFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIGKCGSEGMKDFMNETKLIDLLNGSDYVPTYQDKDGDWMLVGDVPWESRQEPWKSARTEAEDILGFRNNNRLGCSSASRGSKLTRATSGLI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr11117g00002 251 MobiDBLite consensus disorder prediction 41 66 - -
Mupr11117g00002 251 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 207 IPR003311 GO:0005634|GO:0006355
Mupr11117g00002 251 ProSiteProfiles PB1 domain profile. 121 237 IPR000270 GO:0005515
Mupr11117g00002 251 MobiDBLite consensus disorder prediction 1 92 - -
Mupr11117g00002 251 Pfam AUX/IAA family 6 207 IPR033389 -
Mupr11117g00002 251 SUPERFAMILY CAD & PB1 domains 118 218 - -
Mupr11117g00002 251 Gene3D - 116 223 - -
Mupr11117g00002 251 FunFam Auxin-responsive protein 116 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr11117g00002 Mupr-Chr11117 21301 24058 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr11117g00002 113 206 B3 DNA Binding Superfamily AT3G61830 34.043 5.02e-07 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mupr11117g00002 AUX_IAA 2.1e-67 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr11117g00002 K14484 - gmx:100781847 295.434